DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB5 and Megf11

DIOPT Version :10

Sequence 1:NP_609692.3 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_038938374.1 Gene:Megf11 / 691517 RGDID:1582797 Length:1139 Species:Rattus norvegicus


Alignment Length:286 Identity:73/286 - (25%)
Similarity:92/286 - (32%) Gaps:120/286 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 EVCCTGYSASRLMGVTVCRAQCGCQN-GSCK-IPGECECYDGFVRNDNGDCVFACPLG------- 183
            |||....:|. ..|.. |.:.|.|.| |:|. :.|.|.|.:|:   ...||...||.|       
  Rat   431 EVCAVPCAAG-TYGPN-CSSVCSCSNGGTCSPVDGSCTCREGW---QGLDCSLPCPSGTWGLNCN 490

  Fly   184 ----CQNGQCY--LDGSCQCDPGYKLDETRRFCRPICSSGCGSSPRHNCTEPEICGCSKGYQLTD 242
                |.||...  .||||.|.||:..|.    |...|..|....   ||:|.  |.||..     
  Rat   491 ESCVCANGAACSPFDGSCACTPGWLGDS----CELPCPDGTFGL---NCSEH--CDCSHA----- 541

  Fly   243 DGCQPV--------------CE---------PDCGI------GGLCKD-NNQCDCAPGY------ 271
            |||.||              |:         |:|.:      ||.|.. :..|:||||:      
  Rat   542 DGCDPVTGHCCCLAGWTGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPVDGSCECAPGFRGPLCQ 606

  Fly   272 --------------------------NLRDGVCQA--------------------DCYQKC---N 287
                                      :...|:|:.                    ||.|.|   |
  Rat   607 RICPPGFYGHGCAQPCPLCVHSRGPCHHVSGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCAN 671

  Fly   288 NGVCVS-RNRCLCDPGYTYHEQSTMC 312
            ||.|.. ...|.|.||:|..:.|..|
  Rat   672 NGTCSPIDGSCQCFPGWTGKDCSQAC 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_609692.3 None
Megf11XP_038938374.1 EMI 25..94 CDD:462204
EGF_CA 189..234 CDD:473889
Laminin_EGF 275..320 CDD:395007
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.