DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB5 and STAB2

DIOPT Version :9

Sequence 1:NP_001188802.1 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_060034.9 Gene:STAB2 / 55576 HGNCID:18629 Length:2551 Species:Homo sapiens


Alignment Length:246 Identity:71/246 - (28%)
Similarity:84/246 - (34%) Gaps:82/246 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 CRIWVPPDTVEK---YSYPSVIQTDQA-NRLSL---IEVCCTGYSASRLMGVTVCRAQCG----- 150
            |..|..|..|::   |:.|.....:.. .|.||   |..||.||....      |:|..|     
Human  1911 CPRWSKPKGVKQKCLYNLPFKRNLEGCRERCSLVIQIPRCCKGYFGRD------CQACPGGPDAP 1969

  Fly   151 CQN-GSC----KIPGECECYDGFVRNDNGDCVFACPLGCQNGQCYLDGSCQCDPGYKLDETRRF- 209
            |.| |.|    ...|||:|..||    ||.   ||.:              |.||       || 
Human  1970 CNNRGVCLDQYSATGECKCNTGF----NGT---ACEM--------------CWPG-------RFG 2006

  Fly   210 --CRPICSSGCGSSPRHNC----TEPEICGCSKGYQLTDDGCQ------PVCEPDCGIGGLCKDN 262
              |.|     ||.|....|    |....|.|..|:  |...|.      .||.|.|.....||:|
Human  2007 PDCLP-----CGCSDHGQCDDGITGSGQCLCETGW--TGPSCDTQAVLPAVCTPPCSAHATCKEN 2064

  Fly   263 NQCDCAPGYNLRDGV-CQADCYQKCNNGVCVSRNR---------CLCDPGY 303
            |.|:|...|. .||: |....:.|.:||.|....|         |.|..||
Human  2065 NTCECNLDYE-GDGITCTVVDFCKQDNGGCAKVARCSQKGTKVSCSCQKGY 2114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_001188802.1 None
STAB2NP_060034.9 EGF_3 246..275 CDD:289699
EGF_3 326..361 CDD:289699
Fasciclin 382..505 CDD:280607
Fasciclin 526..654 CDD:280607
EGF_3 837..865 CDD:289699
EGF_3 920..951 CDD:289699
EGF_3 957..993 CDD:289699
Fasciclin 1009..1129 CDD:280607
Fasciclin 1148..1265 CDD:280607
EGF_3 1437..1469 CDD:289699
EGF_3 1475..1511 CDD:289699
EGF_3 1517..1553 CDD:289699
EGF_3 1559..1595 CDD:289699
Fasciclin 1617..1726 CDD:280607
Fasciclin 1752..1882 CDD:280607
EGF_3 2086..2121 CDD:289699 9/29 (31%)
EGF_3 2127..2164 CDD:289699
Link_domain_TSG_6_like 2198..2290 CDD:239592
FAS1 2356..2449 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000269|PubMed:18519035 2504..2514
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2512..2551
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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