DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB5 and Ccbe1

DIOPT Version :10

Sequence 1:NP_609692.3 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_848908.1 Gene:Ccbe1 / 320924 MGIID:2445053 Length:408 Species:Mus musculus


Alignment Length:208 Identity:48/208 - (23%)
Similarity:67/208 - (32%) Gaps:54/208 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ETQSDRGQHKCRIWVPPDTVEKYSYPSVIQTDQANRLSLIEVCCTGYSASRLMGVTVCRAQCGCQ 152
            |...||.:..|    ..:.:....||.:..:.:.. ....:.||.||..  ::|..:......|.
Mouse    38 EEPEDRDREVC----SENKITTTKYPCLKSSGELT-TCFRKKCCKGYKF--VLGQCIPEDYDICA 95

  Fly   153 NGSCKIPGECECYDGFVRNDNGDCVFACPLGCQNGQCYLDGSCQCDPGYKLDETR--RFCRPIC- 214
            ...|    |.:|.|.|.|                      ..|.|.|||:.|..|  :..||.| 
Mouse    96 QAPC----EQQCTDNFGR----------------------VLCTCYPGYRYDRERHQKRERPYCL 134

  Fly   215 -SSGCGSSPRHNCTEPEI-------CGCSKGYQLTDDG--CQPVCEPDCGIGGLCKDNNQCDCAP 269
             ...|.:|....|....|       |.|.:||.|.|||  |....:.....|...|..|:     
Mouse   135 DIDECATSNTTLCAHICINTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENE----- 194

  Fly   270 GYNLRDGVCQADC 282
               ::.|.|.|.|
Mouse   195 ---VKAGTCCATC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_609692.3 None
Ccbe1NP_848908.1 EGF_CA 135..176 CDD:214542 12/40 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..408
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.