DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB5 and Ccbe1

DIOPT Version :9

Sequence 1:NP_001188802.1 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_848908.1 Gene:Ccbe1 / 320924 MGIID:2445053 Length:408 Species:Mus musculus


Alignment Length:208 Identity:48/208 - (23%)
Similarity:67/208 - (32%) Gaps:54/208 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ETQSDRGQHKCRIWVPPDTVEKYSYPSVIQTDQANRLSLIEVCCTGYSASRLMGVTVCRAQCGCQ 152
            |...||.:..|    ..:.:....||.:..:.:.. ....:.||.||..  ::|..:......|.
Mouse    38 EEPEDRDREVC----SENKITTTKYPCLKSSGELT-TCFRKKCCKGYKF--VLGQCIPEDYDICA 95

  Fly   153 NGSCKIPGECECYDGFVRNDNGDCVFACPLGCQNGQCYLDGSCQCDPGYKLDETR--RFCRPIC- 214
            ...|    |.:|.|.|.|                      ..|.|.|||:.|..|  :..||.| 
Mouse    96 QAPC----EQQCTDNFGR----------------------VLCTCYPGYRYDRERHQKRERPYCL 134

  Fly   215 -SSGCGSSPRHNCTEPEI-------CGCSKGYQLTDDG--CQPVCEPDCGIGGLCKDNNQCDCAP 269
             ...|.:|....|....|       |.|.:||.|.|||  |....:.....|...|..|:     
Mouse   135 DIDECATSNTTLCAHICINTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENE----- 194

  Fly   270 GYNLRDGVCQADC 282
               ::.|.|.|.|
Mouse   195 ---VKAGTCCATC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_001188802.1 None
Ccbe1NP_848908.1 EGF_CA 135..176 CDD:214542 12/40 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..408
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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