DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB5 and lag-2

DIOPT Version :9

Sequence 1:NP_001188802.1 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_503877.1 Gene:lag-2 / 178755 WormBaseID:WBGene00002246 Length:402 Species:Caenorhabditis elegans


Alignment Length:308 Identity:66/308 - (21%)
Similarity:92/308 - (29%) Gaps:100/308 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FFHLMVCLPSIYTNVPSYSDRYNRRPVSQDPGMGTYGRGYMENRQLSYNRP--------GPA--- 65
            |..|:.|||.:...|..:.:..:.:.||.        |..:.....|.|||        ||.   
 Worm     5 FLLLLTCLPVLQARVEVHQEFISSKRVSV--------RFEIVTESHSPNRPVTFDLFPRGPKTNI 61

  Fly    66 ----NFQDPRNVELQPKRREYLIRSHETQ--SDRGQHKCRI------WVPPDTVEKYSYPSVIQT 118
                .|....|..:|      |::....|  .||...|.:.      |: .||   ::..|.|..
 Worm    62 ILLDTFNPVFNFSIQ------LVQPFTGQPLGDRIYRKVQFSGTNQPWI-NDT---FTTTSGISL 116

  Fly   119 DQANRLSLIEVCCTGYSASRLMGVTVCRAQCGCQ-----NGSCKIPGECECYDGFVRNDNGDCVF 178
            ..|..::    |...|..:|      |...|...     ...|...|...|..|::....|..|.
 Worm   117 SVATEVT----CARNYFGNR------CENFCDAHLAKAARKRCDAMGRLRCDIGWMGPHCGQAVD 171

  Fly   179 ACPLGCQNGQCYLDGSCQCDPGYKLDETRRFCRPICSSGCGSSPRH-NCTEPEICGCSKG----- 237
            .....|:|     ||.|                 :.|....|.|.. :..|..||.|:.|     
 Worm   172 PRKCSCEN-----DGIC-----------------VSSMIHPSQPNQTSSNEQLICECTNGFTGTR 214

  Fly   238 --------YQLT---DDGCQPVCEPDCGIGGLCKDNNQ---CDCAPGY 271
                    :|||   .|.|.  .:..|..|..|..|..   |.||.|:
 Worm   215 CEIFGFNQFQLTAPRPDACS--VKDACLNGAKCFPNGPKVFCSCAVGF 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_001188802.1 None
lag-2NP_503877.1 DSL 103..166 CDD:128366 15/76 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.