DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB5 and Dlk1

DIOPT Version :9

Sequence 1:NP_001188802.1 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_038967531.1 Gene:Dlk1 / 114587 RGDID:619931 Length:416 Species:Rattus norvegicus


Alignment Length:162 Identity:49/162 - (30%)
Similarity:66/162 - (40%) Gaps:46/162 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 GDCVF---ACPLGC--QNGQCYLDGSCQCDPGYKLDETRRFCRPICSSGCGSSP---RHNCTEPE 230
            |..||   .|...|  |:|.|..|..|:|:||::        .|:|.. |.:||   ...|.||.
  Rat    50 GKIVFLGAECDPACDPQHGFCEADNVCRCEPGWE--------GPLCEK-CVTSPGCVNGLCEEPW 105

  Fly   231 ICGCSKGYQLTDDGCQPVCEPD--------CGIGGLC----KDNNQCDCAPGYNLRD-----GVC 278
            .|.|.:|:    ||  ..||.|        |...|.|    |...:|.|.||::.:|     |.|
  Rat   106 QCVCKEGW----DG--KFCEIDIRACTSTPCANNGTCVDLEKGQYECSCTPGFSGKDCQHKAGPC 164

  Fly   279 QADCYQKCNNGVCV------SRNRCLCDPGYT 304
            ..:.....:.|.||      |...|||.||::
  Rat   165 VINGSPCQHGGACVDDEGRASHASCLCPPGFS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_001188802.1 None
Dlk1XP_038967531.1 EGF_CA 121..158 CDD:238011 10/36 (28%)
EGF_CA 168..201 CDD:238011 9/29 (31%)
EGF_CA 208..238 CDD:238011
EGF_CA 245..277 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I5147
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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