DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB5 and Stab1

DIOPT Version :9

Sequence 1:NP_001188802.1 Gene:NimB5 / 34815 FlyBaseID:FBgn0028936 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_008769275.1 Gene:Stab1 / 100363145 RGDID:2324745 Length:2630 Species:Rattus norvegicus


Alignment Length:314 Identity:80/314 - (25%)
Similarity:110/314 - (35%) Gaps:94/314 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 FQDPRNVELQPKRREYLIRSHETQSDRG-QHKC--RIWVPPDTVEKYSYPSVIQTDQANRLSLIE 128
            |:..:..:||...|:..:........|| .:.|  :|.||.      ..|....|       |.|
  Rat  1339 FRCTQGFQLQDTPRKSCVYRSGLSFSRGCSYTCAKKIQVPD------CCPGFFGT-------LCE 1390

  Fly   129 VC-------CTGYS--ASRLMGVTVCRAQCGCQNGSCKI----------PGECECYDGFVR---N 171
            .|       |:|:.  ..|.:|...||.|.|....:|::          .|.|:|..|..:   .
  Rat  1391 PCPGGLGGVCSGHGQCQDRFLGNGECRCQEGFHGTACEMCELGRYGPTCSGVCDCDHGLCQEGLR 1455

  Fly   172 DNGDCVF----------------ACPLGCQ-NGQCYLDGS----CQCDPGYKLDETRRFCRPI-- 213
            .||.|:.                .||..|. |..|..|.:    |.|..||..:.:  :|..:  
  Rat  1456 GNGSCICNVGWQGLRCDQKITDRQCPKKCDPNANCIQDSAGIPVCVCAAGYSGNGS--YCSEVDP 1518

  Fly   214 CSSGCGS-SPRHNCTE----PEICGCSKGYQLTDDG--CQPV--C---EPDCGIGGLC----KDN 262
            |:||.|. ||..|||:    ...|.|..||  |.||  ||.:  |   ...|.:...|    ...
  Rat  1519 CTSGHGGCSPYANCTKVAPGQRTCTCLDGY--TGDGELCQEINSCLVHNGGCHVNAECIPTGPQQ 1581

  Fly   263 NQCDCAPGYNLRDGVCQADCYQKC--NNG------VCVS----RNRCLCDPGYT 304
            ..|:|..||: .||:........|  |||      ||.|    :..|.||..:|
  Rat  1582 VSCNCREGYS-GDGIQSCKLLDPCSQNNGGCSPYAVCKSTGDGQRTCSCDSTHT 1634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB5NP_001188802.1 None
Stab1XP_008769275.1 Fasciclin 391..494 CDD:295423
Fasciclin 523..647 CDD:280607
EGF_3 834..863 CDD:289699
EGF_3 918..949 CDD:289699
EGF_3 955..991 CDD:289699
Fasciclin <1100..1180 CDD:280607
Fasciclin 1224..1313 CDD:295423
EGF_3 1519..1555 CDD:289699 16/37 (43%)
EGF_3 1561..1595 CDD:289699 8/34 (24%)
EGF_3 1604..1641 CDD:289699 11/31 (35%)
Fasciclin 1666..1770 CDD:280607
Fasciclin 1796..1926 CDD:280607
EGF_Lam 2037..2082 CDD:238012
EGF_3 2154..2189 CDD:289699
EGF_3 2195..2232 CDD:289699
Link_Domain 2267..2359 CDD:295393
FAS1 2426..2521 CDD:214719
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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