DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and tnfaip6

DIOPT Version :10

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001035333.2 Gene:tnfaip6 / 678516 ZFINID:ZDB-GENE-060421-2654 Length:271 Species:Danio rerio


Alignment Length:260 Identity:56/260 - (21%)
Similarity:75/260 - (28%) Gaps:91/260 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 CGERCQENGFCVAGGKCVCFTDFVLNYRNNCVPTCPLGCPHGRCYLNGTC-----QCDKG-YELD 201
            ||.|.......|.|...|........|:|        |..|...:|....     :..|| |:| 
Zfish     4 CGLRAMRALTAVFGVLIVLKETEAWGYKN--------GILHNSIWLEQAAGVYHRESRKGRYQL- 59

  Fly   202 GSRKFCQPQCN------ATCGHNEVCLEPGKCSCAEGY-TRG------LRESAALGCQPICIPDC 253
             :.|..:..||      ||....|...:.|...||.|: .:|      ::..:..|...:.|.|.
Zfish    60 -TYKEAKAVCNFEGGTLATFDQLEAARQIGFHVCAAGWLDKGRVGYPIVKAGSNCGFGKVGIIDY 123

  Fly   254 GYG---------HCVRPNECEC------------FPGFQKRKNGITCEGDCYMTCENGFCANKTT 297
            ||.         :|..|...||            .||:......   |..||......|      
Zfish   124 GYRLNKSERWDVYCYNPVAKECGGVHTDPEKVLVSPGYPDEYQD---EQICYWHIRVRF------ 179

  Fly   298 CVCQNGYR-------YD-KNTTTCLPD------------------CGDNCDNGVCISPGNCRCFK 336
                 |:|       :| :..|.||.|                  |||...:.. ||.||....|
Zfish   180 -----GHRIRLHFLDFDIEEDTDCLSDHLEIYDSYDDVSGFVGRYCGDQLPDDF-ISTGNVMTLK 238

  Fly   337  336
            Zfish   239  238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
tnfaip6NP_001035333.2 Link_domain_TSG_6_like 46..138 CDD:239592 20/93 (22%)
CUB 145..254 CDD:395345 22/109 (20%)

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