DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and STAB2

DIOPT Version :10

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_060034.9 Gene:STAB2 / 55576 HGNCID:18629 Length:2551 Species:Homo sapiens


Alignment Length:368 Identity:93/368 - (25%)
Similarity:125/368 - (33%) Gaps:123/368 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 VIEV--CCKGWRRYEYDWSQCVPDCGERCQENGFCV----AGGKCVCFTDF-----VLNYRNNCV 174
            ||::  ||||:  :..|...|.......|...|.|:    |.|:|.|.|.|     .:.:.....
Human  1944 VIQIPRCCKGY--FGRDCQACPGGPDAPCNNRGVCLDQYSATGECKCNTGFNGTACEMCWPGRFG 2006

  Fly   175 PTC-PLGC-PHGRCYLNGTCQCDKGYELDGSRKFCQPQCNATCGHNEVCLEPGKCSCAEGYTRGL 237
            |.| |.|| .||        |||.|  :.||                     |:|.|..|:|...
Human  2007 PDCLPCGCSDHG--------QCDDG--ITGS---------------------GQCLCETGWTGPS 2040

  Fly   238 RESAALGCQPICIPDC-GYGHCVRPNECECFPGFQKRKNGITCEGDCYMTCENGFCA-------- 293
            .::.|: ...:|.|.| .:..|...|.|||  ......:||||....:...:||.||        
Human  2041 CDTQAV-LPAVCTPPCSAHATCKENNTCEC--NLDYEGDGITCTVVDFCKQDNGGCAKVARCSQK 2102

  Fly   294 -NKTTCVCQNGYRYDKNTTTCLPDCGDNCDNGVC--------ISPG--NCRCFKGYVRNRERCEA 347
             .|.:|.||.||:.|.::.|.:..|.|.. ||.|        ..||  .|.|...||.:...||.
Human  2103 GTKVSCSCQKGYKGDGHSCTEIDPCADGL-NGGCHEHATCKMTGPGKHKCECKSHYVGDGLNCEP 2166

  Fly   348 V------CV---GGCGFYGKCI----APNVCG---------------------CAIVPGPERTY- 377
            .      |:   |.|....||:    .....|                     ||.......|| 
Human  2167 EQLPIDRCLQDNGQCHADAKCVDLHFQDTTVGVFHLRSPLGQYKLTFDKAREACANEAATMATYN 2231

  Fly   378 -----QRCEYGLCNA----MGRC---------RCQVGMTRFID 402
                 |:.:|.||:|    .||.         .|..|:...:|
Human  2232 QLSYAQKAKYHLCSAGWLETGRVAYPTAFASQNCGSGVVGIVD 2274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
STAB2NP_060034.9 EGF_3 246..275 CDD:463759
EGF_3 326..361 CDD:463759
Fasciclin 382..505 CDD:396845
Fasciclin 526..654 CDD:396845
EGF_3 837..865 CDD:463759
EGF_3 876..908 CDD:463759
EGF_3 920..951 CDD:463759
EGF_3 957..993 CDD:463759
Fasciclin 1009..1129 CDD:396845
Fasciclin 1148..1265 CDD:396845
EGF_3 1437..1469 CDD:463759
EGF_3 1475..1511 CDD:463759
EGF_3 1517..1553 CDD:463759
EGF_3 1559..1595 CDD:463759
Fasciclin 1617..1726 CDD:396845
Fasciclin 1752..1882 CDD:396845
EGF_3 2086..2121 CDD:463759 11/34 (32%)
EGF_3 2127..2164 CDD:463759 11/37 (30%)
Link_domain_TSG_6_like 2198..2290 CDD:239592 15/77 (19%)
FAS1 2356..2449 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000269|PubMed:18519035 2504..2514
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2512..2551
Blue background indicates that the domain is not in the aligned region.

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