DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and Dkk4

DIOPT Version :9

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001102802.1 Gene:Dkk4 / 502097 RGDID:1563172 Length:221 Species:Rattus norvegicus


Alignment Length:225 Identity:46/225 - (20%)
Similarity:64/225 - (28%) Gaps:104/225 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 SQCVPD------------------CG------ERCQENGFCVAGGKCVCFTDFVLNYRNNCVPTC 177
            ||||.|                  |.      .|||.:..|..|  .||..|......|    |.
  Rat    39 SQCVSDKDCNVGKFCFALHDERSFCATCRRVRRRCQRSAMCCPG--TVCVNDVCTAVEN----TR 97

  Fly   178 PL------GCPHGRCYLNGT------------------CQCDKGYELDGSRKFCQPQCNATCGHN 218
            |:      |  ....|..||                  .|.:||.|.:...:      .:.||  
  Rat    98 PVMDRNTDG--QDGTYAEGTTKWPAEENRPQGKPSTKKSQSNKGQEGESCLR------TSDCG-- 152

  Fly   219 EVCLEPGKCSCAEGYTRGLRESAALGCQPICIPD--C---GYGHCVRPNE----CECFPGFQKRK 274
                 ||.| ||..:...:       |:|:.:..  |   |:....:..|    |:|.||     
  Rat   153 -----PGLC-CARHFWTKI-------CKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPG----- 199

  Fly   275 NGITCEGDCYMTCENGFCANKTTC---VCQ 301
                      ::|.:....|:...   |||
  Rat   200 ----------LSCRSQVTGNRQHTRLRVCQ 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
Dkk4NP_001102802.1 Dickkopf_N 41..91 CDD:282549 12/51 (24%)
Prokineticin <145..202 CDD:148298 16/92 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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