DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and Dkk1

DIOPT Version :10

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001099820.1 Gene:Dkk1 / 293897 RGDID:1307313 Length:270 Species:Rattus norvegicus


Alignment Length:303 Identity:56/303 - (18%)
Similarity:82/303 - (27%) Gaps:115/303 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LSSSTTTRKPYIIPNGL-SLP----RRGEHPDKCRQEVPAVFFQYDKEVKIVGN----------- 112
            |..|.|.....|..|.: :||    ..|..|.......|.|.::...:.:.:.|           
  Rat    27 LGVSATLNSVLINSNAIKNLPPPLGGAGGQPGSAVSVAPGVLYEGGNKYQTLDNYQPYPCAEDEE 91

  Fly   113 SSTNPY----------MNVIEVC--CKGWRRYEYDWSQCVPDCGERCQENGFCVAGGKCVCFTDF 165
            ..|:.|          :..:::|  |:..|:              ||..:..|..|..|      
  Rat    92 CGTDEYCSSPSRGAAGVGGVQICLACRKRRK--------------RCMRHAMCCPGNYC------ 136

  Fly   166 VLNYRNN-CVPT----CP-----------LGCPHGR--CYLNGTCQCDKGYELDGSRKFCQPQCN 212
                :|. |:|:    .|           ||..||.  .|...|....|.|...|.         
  Rat   137 ----KNGICMPSDHSHLPRGEIEEGIIENLGNDHGAGDGYPRRTTLTSKIYHTKGQ--------- 188

  Fly   213 ATCGHNEVCLEPGKCS----CAEGYTRGLRESAALGCQPICIPDCGYGHCVRPNECECFPGFQKR 273
                ...|||....|:    ||..:           ...||.|....|..       |....:|.
  Rat   189 ----EGSVCLRSSDCATGLCCARHF-----------WSKICKPVLKEGQV-------CTKHRRKG 231

  Fly   274 KNGITCEGDCYMTCENGFCANKTTCVCQNGYRYDKNTT---TC 313
            .:|:.....||       |.....|..|..:....|::   ||
  Rat   232 SHGLEIFQRCY-------CGEGLACRIQKDHHQTSNSSRLHTC 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
Dkk1NP_001099820.1 Dkk1_N_Cys1 19..142 CDD:438010 23/138 (17%)
Dkk1_Cys2 186..268 CDD:437998 22/120 (18%)

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