DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and Megf10

DIOPT Version :9

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001094127.1 Gene:Megf10 / 291445 RGDID:735084 Length:1145 Species:Rattus norvegicus


Alignment Length:490 Identity:110/490 - (22%)
Similarity:158/490 - (32%) Gaps:189/490 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GEHPDKCRQEVPAVFFQYDKEVKIVGNSSTNPYMNVIEVCCKGWR-----------RYEYDWSQC 139
            |:|..:|.|..|.            .|.....::.....|..||.           |:   ...|
  Rat   228 GKHGPQCEQRCPC------------QNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRF---GKNC 277

  Fly   140 VPDCGERCQENGFC-VAGGKCVCFTDFVLNYRNNCVPTCPLG-----------CPH-GRCY-LNG 190
            ..:|  :|...|.| .|.|:|.|...:.   ...|...||:|           |.: |:|| ::|
  Rat   278 SQEC--QCHNGGACDAATGQCHCSPGYT---GERCQDECPVGTYGVRCAETCRCVNGGKCYHVSG 337

  Fly   191 TCQCDKGY-------------------------ELDGSRKFCQPQ--------------CNATCG 216
            ||.|:.|:                         .||.:.. |.|.              ||.||.
  Rat   338 TCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLDNTHS-CHPMSGECGCKPGWSGLYCNETCS 401

  Fly   217 ---HNEVCLE-------------PGKCSCAEGY------------TRGLRESAALGCQ--PICIP 251
               :.|.|.:             .|:|:||.|:            ..|:..|:..||:  .:|.|
  Rat   402 PGFYGEACQQICSCQNGADCDSVSGRCACAPGFKGTDCSTPCPLGRYGINCSSRCGCKNDAVCSP 466

  Fly   252 DCGYGHCVRPNECECFPGFQKRKNGITCEG-----DCYMTCE--NGFCANKT--TCVCQNGYRYD 307
            ..|        .|.|..|:......|:|..     .|.:||:  ||...|..  ||.|..|:|.:
  Rat   467 VDG--------SCICKAGWHGVDCSISCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGWRGE 523

  Fly   308 KNTTTCLP-----DCGDNCD----NGVCISPGNCRCFKGYVRNRERCEAVCVGG-----CGF--- 355
            |....|..     :|.:.||    :|...:.|:|||..|:  :...|::||..|     |..   
  Rat   524 KCEFPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLPGW--SGVHCDSVCAEGRWGPNCSLPCY 586

  Fly   356 --YGKCIAPN--VCGCAIVPG---------------PERTYQRC-----EYGLCNAM-GRCRCQV 395
              .|...:|:  :|.||  ||               ..|..|.|     ..|.|:.: |.|.|..
  Rat   587 CKNGASCSPDDGICECA--PGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLP 649

  Fly   396 GMT-----------RFIDRCMSPDTVTTYASMNPV 419
            |.|           ||...|....|.|...:.||:
  Rat   650 GFTGALCNEVCPSGRFGKNCAGVCTCTNNGTCNPI 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
Megf10NP_001094127.1 EMI 32..99 CDD:400092
EGF_Lam 281..318 CDD:214543 12/41 (29%)
EGF_CA 542..587 CDD:419698 13/46 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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