DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and STAB1

DIOPT Version :10

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_005265030.1 Gene:STAB1 / 23166 HGNCID:18628 Length:2595 Species:Homo sapiens


Alignment Length:409 Identity:95/409 - (23%)
Similarity:139/409 - (33%) Gaps:135/409 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LREH-EALQRRLSSST-------------TTRKPYIIPNGLSLPRRGEHPDKCRQEVPAVFFQYD 104
            |..| |||:.:..:.|             |.||..:..:|.|..|...:....:.:||.      
Human  1261 LHSHAEALREKCVNCTRRFRCTQGFQLQDTPRKSCVYRSGFSFSRGCSYTCAKKIQVPD------ 1319

  Fly   105 KEVKIVGNSSTNPYMNVIEVCCKGWRRYEYDWSQCVPDC----GERCQENGFC----VAGGKCVC 161
                                ||.|     :..:.|.| |    |..|..:|.|    :..|:|.|
Human  1320 --------------------CCPG-----FFGTLCEP-CPGGLGGVCSGHGQCQDRFLGSGECHC 1358

  Fly   162 FTDF---------VLNYRNNCVPTCPLGCPHGRCYL----NGTCQCDKGYE-LDGSRKFCQPQCN 212
            ...|         :..|..||...|  .|.||.|..    :|:|.|:.|:: |...:|...|||.
Human  1359 HEGFHGTACEVCELGRYGPNCTGVC--DCAHGLCQEGLQGDGSCVCNVGWQGLRCDQKITSPQCP 1421

  Fly   213 ATCGHNEVCLE----PGKCSCAEGYTRGLRESAALGCQPICIPDCGYGHCVRPNECECFPGFQKR 273
            ..|..|..|::    ...|:||.||:     ...:.|..  :..|.:||                
Human  1422 RKCDPNANCVQDSAGASTCACAAGYS-----GNGIFCSE--VDPCAHGH---------------- 1463

  Fly   274 KNGITCEGDC--YMTCENGFCANKTTCVCQNGYRYD----KNTTTCLPDCGDNCDNGVCISPG-- 330
                   |.|  :..|.. ....:.||.||:||..|    :...:||...|....:..||..|  
Human  1464 -------GGCSPHANCTK-VAPGQRTCTCQDGYMGDGELCQEINSCLIHHGGCHIHAECIPTGPQ 1520

  Fly   331 --NCRCFKGYVRNRER-CEAV--CV---GGCGFYGKCIAPNVCGCAIVPGPERTYQRCEYGLCNA 387
              :|.|.:||..:..| ||.:  |.   |||..|..|.:..        ..:||   |.....:.
Human  1521 QVSCSCREGYSGDGIRTCELLDPCSKNNGGCSPYATCKSTG--------DGQRT---CTCDTAHT 1574

  Fly   388 MG---RCRCQVGMTRFIDR 403
            :|   .||.:||:....|:
Human  1575 VGDGLTCRARVGLELLRDK 1593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
STAB1XP_005265030.1 Fasciclin 393..490 CDD:470649
FAS1 496..643 CDD:441906
EGF_3 831..859 CDD:463759
EGF_3 865..902 CDD:463759
EGF_3 914..945 CDD:463759
EGF_3 951..987 CDD:463759
Fasciclin 999..1120 CDD:396845
Fasciclin 1139..1241 CDD:470649
EGF_3 1424..1453 CDD:463759 8/33 (24%)
EGF_3 1459..1495 CDD:463759 13/59 (22%)
EGF_3 1501..1538 CDD:463759 11/36 (31%)
EGF_3 1544..1581 CDD:463759 10/47 (21%)
Fasciclin 1606..1710 CDD:396845
Fasciclin 1736..1866 CDD:396845
EGF_Lam <1992..2021 CDD:214543
EGF_3 2095..2130 CDD:463759
EGF_3 2136..2173 CDD:463759
Link_Domain 2208..2300 CDD:470631
Blue background indicates that the domain is not in the aligned region.

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