DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and Scarf2

DIOPT Version :10

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_036015777.1 Gene:Scarf2 / 224024 MGIID:1858430 Length:838 Species:Mus musculus


Alignment Length:430 Identity:103/430 - (23%)
Similarity:136/430 - (31%) Gaps:173/430 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 YIIPNGLSLPR----RGEHPDKCRQEVPAVFFQYDKEVKIVGNSSTNPYMNVIEVCCKGWRRYEY 134
            :::| ||:.|:    ||.  :.||                      .|...|: .||.|||:...
Mouse    27 WLLP-GLAAPQDLNPRGR--NVCR----------------------TPGSQVL-TCCAGWRQLGD 65

  Fly   135 DWSQCVPDCGERCQENGFCVAGGKCVCFTDFVLNYRNNCVPTCP--------------------- 178
            :....|.:....|.||..||..|:|.|...:   :..||...||                     
Mouse    66 ECGIAVCEGNSTCSENEVCVRPGECRCRHGY---FGANCDTKCPRQFWGPDCKERCSCHPHGQCE 127

  Fly   179 --------------------LGCPHGRCY-LNGTCQCDKG----------YELDGSRKFCQPQ-- 210
                                ..|.||.|: .:|.|:|:.|          |....||  |.||  
Mouse   128 DVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSR--CDPQTG 190

  Fly   211 ------------CNATCGHNEVCLE--PGKCSCAEGYTRGLRESAALGCQPICIPDCGYGHCVRP 261
                        ||..|..|....|  .|:|.|.|... |.|      |...|  .|.:|.| .|
Mouse   191 ACLCHVGWWGRSCNNQCACNSSPCEQQSGRCQCRERMF-GAR------CDRYC--QCSHGRC-HP 245

  Fly   262 --NECECFPGFQ-----------------KRKNG--------ITCEGDCYMTCENGFCANKTTCV 299
              ..|.|.||::                 :|:.|        ...||.| :|||.|:...|....
Mouse   246 VDGTCACDPGYRGKYCREPCPAGFYGPGCRRRCGQCKGQQPCTVVEGRC-LTCEPGWNGTKCDQP 309

  Fly   300 CQNGYRYDKNTTTCLPDCGDNC----DNGVCIS-PGNC-RCFKGYVRNRERCEAVCVGGCGFYGK 358
            |..|: |.:.       ||..|    |...|.. .|.| .|..|::  .:|||..|..|.  ||:
Mouse   310 CATGF-YGEG-------CGHRCPPCRDGHACNHVTGKCTHCNAGWI--GDRCETKCSNGT--YGE 362

  Fly   359 CIAPNVCGCAIVPGPERTYQRCEYGLCN-AMGRCRCQVGM 397
                   .||.|      ...|..|.|: ..|||.|..|:
Mouse   363 -------DCAFV------CSDCGSGHCDFQSGRCLCSPGV 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
Scarf2XP_036015777.1 PHA03307 526..>836 CDD:223039
PHA03247 <683..838 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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