DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB4 and Stab1

DIOPT Version :10

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_619613.2 Gene:Stab1 / 192187 MGIID:2178742 Length:2571 Species:Mus musculus


Alignment Length:347 Identity:82/347 - (23%)
Similarity:110/347 - (31%) Gaps:123/347 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PNGLSLPRRGEHPDKCRQEVPAVFFQYDKEVKIVGNSSTNPYMNVIEVCCKGWRRYEYDWSQCVP 141
            ||||::.::| ..|.|.|.:..                        ..||||:  :..|.:||..
Mouse   698 PNGLNVLKKG-CADYCNQTITK------------------------RGCCKGF--FGPDCTQCPG 735

  Fly   142 DCGERCQENGFCVAG----GKCVCFTDF----------VLNYRNNCVPTCPLGCPHGRC----YL 188
            .....|...|.|..|    |.|:||.|:          ...:...|...|  ||.||.|    ..
Mouse   736 GFSNPCYGKGNCSDGVRGNGACLCFPDYKGIACHICSDPKKHGEQCQEDC--GCVHGLCDNRPGS 798

  Fly   189 NGTCQ---CDKGYELDGSRKFCQP---QCNATCGHNEVCLEPGKCSCAEGYTRGLRESAALGCQP 247
            .|.||   |..|::    .:||..   .|.:| |..:.|.....|...||..|            
Mouse   799 GGVCQQGTCAPGFQ----GRFCNESMGNCGST-GLAQPCHSDAHCVIQEGVAR------------ 846

  Fly   248 ICIPDCGYGHCVRPNECECFPGFQKRKNGITCE----------GDCYMTCENGFCA----NKTTC 298
                            |.|..||:  .||.:|:          |.|   .||..|.    ....|
Mouse   847 ----------------CVCHDGFE--GNGFSCKRSNPCSRPDRGGC---SENAECVPGDLGTHHC 890

  Fly   299 VCQNGYRYDKNTTTCLPDCGDNCDNG-----VC--ISPG--NCRCFKGYVRNRERCEAV--C--- 349
            :|..|:..|......:.:||.:...|     :|  :.||  .|.|..|:..|...|..:  |   
Mouse   891 ICHKGWSGDGRICVAIDECGLDTRGGCHADALCSYVGPGQSRCTCKLGFAGNGYECSPIDPCRVG 955

  Fly   350 VGGCGFYGKCIA----PNVCGC 367
            .|||.....|.|    ..||.|
Mouse   956 NGGCHGLATCKAVGGGQRVCTC 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
Stab1NP_619613.2 FAS1 499..644 CDD:441906
EGF_3 831..860 CDD:463759 11/58 (19%)
EGF_3 915..946 CDD:463759 8/30 (27%)
EGF_3 952..988 CDD:463759 9/26 (35%)
Fasciclin 1000..1121 CDD:396845
EGF_3 1460..1496 CDD:463759
EGF_3 1502..1539 CDD:463759
EGF_3 1545..1582 CDD:463759
Fasciclin 1607..1711 CDD:396845
Fasciclin 1737..1867 CDD:396845
EGF_Lam <1992..2021 CDD:214543
EGF_3 2095..2130 CDD:463759
EGF_3 2136..2173 CDD:463759
Link_Domain 2208..2300 CDD:470631
FAS1 2367..2463 CDD:214719
Blue background indicates that the domain is not in the aligned region.

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