DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB4 and F56B3.2

DIOPT Version :9

Sequence 1:NP_788046.1 Gene:NimB4 / 34814 FlyBaseID:FBgn0028542 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_499983.2 Gene:F56B3.2 / 176902 WormBaseID:WBGene00018928 Length:432 Species:Caenorhabditis elegans


Alignment Length:378 Identity:85/378 - (22%)
Similarity:113/378 - (29%) Gaps:153/378 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VCCKGWRRYEYDWSQ----------CVP-------DCGERCQENGFCVAGGKCVCF---TDFVLN 168
            :|.:|..|....:::          |.|       .|..:|:|..|| ..|:|.|.   |..|.|
 Worm    50 ICLRGKCRCHPHYTETRDEKGRLPKCAPLPAKIGARCSSKCREPLFC-RNGECQCVQRGTTRVSN 113

  Fly   169 YRNNCVPTCPLG--------C--PHGRCYLNGTCQCDKGYELDGSR------------------- 204
              ..|:.|..:|        |  |...| :|..|.|..|....|||                   
 Worm   114 --GECITTSRVGDRCSRHYDCTSPFSAC-VNSQCVCITGTIQMGSRCVAAANCPFGKLPGQSCVR 175

  Fly   205 ------KFCQPQCNATCGHNEVCLEPGKCS--------CAEGYTRGLRESAALGCQPICIP---- 251
                  .|..|.....|...:||:..|:..        |....|...|.|    |.|...|    
 Worm   176 KSDPSLAFNIPSNQDNCPMGQVCITAGESQVGHCCPVICPLNTTTDTRYS----CDPDAAPALKC 236

  Fly   252 --DCGYGH-----------CVR-------PN----ECECFPGFQKRK---NGITCEGDCYMTCEN 289
              |..|.:           |.|       ||    :..|.|..|...   :...|.|...|.|..
 Worm   237 PSDSHYCYFLSDGSFSQAACCRRPCNAMAPNALYVDYHCMPRGQLNSACTSNAQCGGGEGMECMK 301

  Fly   290 GFCANKTTCVCQNGYR--YD------KN-TTTCLPDC-GDNCD-----------NGVCI----SP 329
            |      .|.||..:.  .|      || :.:|..|| .:|..           |.:|.    .|
 Worm   302 G------QCQCQQNFHPAVDVLTNPLKNPSQSCSRDCESENLSKDTSCMKAVPLNSLCFIQKQCP 360

  Fly   330 GNCRCFKGYVRNRERCEAVCVGGCGF---YGKCI---AP----NVCGCAIVPG 372
            .|..|::|.          |:..|||   .|||:   ||    :....||:||
 Worm   361 QNSGCYRGR----------CMCRCGFAAKNGKCVEIPAPPTTTSAPAPAIIPG 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB4NP_788046.1 None
F56B3.2NP_499983.2 EB 111..157 CDD:279949 14/48 (29%)
EB 266..312 CDD:279949 13/51 (25%)
EB 332..383 CDD:279949 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.