DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and Tnfaip6

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_445834.1 Gene:Tnfaip6 / 84397 RGDID:621359 Length:275 Species:Rattus norvegicus


Alignment Length:239 Identity:51/239 - (21%)
Similarity:74/239 - (30%) Gaps:94/239 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HGRCYLNGTCVCHQNFVLDQETRQFCRPK---------------CSQSCG---THEECVAP---G 194
            ||..:.||  :.|.:..|:|....:.|..               |....|   |:::..|.   |
  Rat    16 HGWGFKNG--IFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVCEYEGGRLATYKQLEAARKIG 78

  Fly   195 QCDCSPGYRRTPDLGCQPVC--APDCGFGK-------------------CVAPNQCECFAGFI-- 236
            ...|:.|:.....:| .|:.  .|:|||||                   |..||..||...|.  
  Rat    79 FHVCAAGWMAKGRVG-YPIVKPGPNCGFGKTGIIDYGIRLNRSERWDAYCYNPNAKECGGVFTDP 142

  Fly   237 KR-------PNWNVCEAECYLNCENGLCESRYKCHCREGYRYDVNTTSCLPECSDNCGQGNGVCI 294
            ||       ||.......||             .|.|..|...::.:....:...:.|     |:
  Rat   143 KRIFKSPGFPNEYDDNQVCY-------------WHIRLKYGQRIHLSFLDFDLEHDPG-----CL 189

  Fly   295 APGVCRCFRGY-EVHGAECRPKCESRFCGKYGRCVAPEICGCGE 337
            |..| ..:..| :|||          |.|:|          ||:
  Rat   190 ADYV-EIYDSYDDVHG----------FVGRY----------CGD 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
Tnfaip6NP_445834.1 Link_domain_TSG_6_like 36..128 CDD:239592 16/92 (17%)
CUB 135..244 CDD:395345 24/117 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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