DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and NimB3

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001033905.1 Gene:NimB3 / 3885611 FlyBaseID:FBgn0054003 Length:122 Species:Drosophila melanogaster


Alignment Length:88 Identity:22/88 - (25%)
Similarity:37/88 - (42%) Gaps:28/88 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 GTCVCHQNFVLD-----QETRQFCRPKCSQSCGTHEECVAPGQCDCSPGY---RRTPDLGCQPVC 214
            |:.:|::...::     ...|||..                    |..||   ..:.:|.|:|:|
  Fly    45 GSGICYRTLTVETINPNSRNRQFSY--------------------CCDGYVNKGTSQNLKCEPIC 89

  Fly   215 APDCGFGKCVAPNQCECFAGFIK 237
            :.||..|.|:||.:|||..|:.:
  Fly    90 SEDCSNGLCLAPEECECAPGYYR 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
NimB3NP_001033905.1 PLN03223 <49..>106 CDD:215637 18/76 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D97941at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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