DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB1 and drpr

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001261276.1 Gene:drpr / 38218 FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster


Alignment Length:558 Identity:134/558 - (24%)
Similarity:173/558 - (31%) Gaps:229/558 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ELYG-DIENTEYGDFESLSQT-------RERQQHLCHREVPSVFFQTERDSPVRGNGSTIYFHRI 88
            |||. |:..||...|:....|       |.....:.||.|              ....||..:||
  Fly    33 ELYNVDVVYTELQSFQERGSTWCVTFPPRCSTYRIKHRVV--------------NKTKTIAKNRI 83

  Fly    89 -EVCCAGYRRDPYANECVPDCSASSPDNCRNGFCRSPGVCECFAEFVRNEHG----ACIHTCPIA 148
             ..||.||...  |.||||.||    :.|::|.|.||..|:|       :||    ||...||..
  Fly    84 VRDCCDGYIAS--AGECVPHCS----EPCQHGRCISPEKCKC-------DHGYGGPACDINCPPG 135

  Fly   149 CQHGRCYL-------------NGTCVCHQNFV----LDQETRQFCRPKCSQSCGTHE--EC-VAP 193
            .....|.:             :|.|.|.:.:.    .|.....|....||:.|....  :| ...
  Fly   136 WYGRNCSMQCDCLNNAVCEPFSGDCECAKGYTGARCADICPEGFFGANCSEKCRCENGGKCHHVS 200

  Fly   194 GQCDCSPGY------RRTPDLG-----------------CQP--------------VCAPDCGFG 221
            |:|.|:||:      .|.|| |                 |||              |||..|..|
  Fly   201 GECQCAPGFTGPLCDMRCPD-GKHGAQCQQDCPCQNDGKCQPETGACMCNPGWTGDVCANKCPVG 264

  Fly   222 ----------KCV--AP-----NQCECFAGF---------------------------------- 235
                      :|.  ||     .||||..|:                                  
  Fly   265 SYGPGCQESCECYKGAPCHHITGQCECPPGYRGERCFDECQLNTYGFNCSMTCDCANDAMCDRAN 329

  Fly   236 ---IKRPNW-------NVCEAECY-LNCENGLCESRYK-----------CHCREGYRYDVNTTSC 278
               |..|.|       .:|||..| |:| |..||...:           |.|..|:.....|..|
  Fly   330 GTCICNPGWTGAKCAERICEANKYGLDC-NRTCECDMEHTDLCHPETGNCQCSIGWSSAQCTRPC 393

  Fly   279 L-----PECSDNCGQGNGVCIAP--GVCRCFRGYEVHGAECRPKCESRFCGKYGRCVAPEICGCG 336
            .     |.|...|...||...:|  |.|.|..|:  .|..|...||.   |.:|:..|.. |.|.
  Fly   394 TFLRYGPNCELTCNCKNGAKCSPVNGTCLCAPGW--RGPTCEESCEP---GTFGQDCALR-CDCQ 452

  Fly   337 EGQQ------HC------RNGSCD---DIEH-----------------------CSCPSGETHFI 363
            .|.:      .|      :|..||   |:.|                       |:|.:|.|.  
  Fly   453 NGAKCEPETGQCLCTAGWKNIKCDRPCDLNHFGQDCAKVCDCHNNAACNPQNGSCTCAAGWTG-- 515

  Fly   364 DRC-LKADRLSQHLNTSEK-RKHFNRQLAYEFNALIGR 399
            :|| .|.|......:.::| :..||..||.:  |..||
  Fly   516 ERCERKCDTGKFGHDCAQKCQCDFNNSLACD--ATNGR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
drprNP_001261276.1 EMI 27..92 CDD:284877 19/72 (26%)
EGF_CA 274..319 CDD:304395 8/44 (18%)
DSL <479..518 CDD:302925 6/40 (15%)
DSL <567..606 CDD:302925
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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