DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and Tnfaip6

DIOPT Version :10

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_033424.1 Gene:Tnfaip6 / 21930 MGIID:1195266 Length:275 Species:Mus musculus


Alignment Length:248 Identity:48/248 - (19%)
Similarity:73/248 - (29%) Gaps:112/248 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HGRCYLNGTCVCHQNFVLDQ-------------------ETRQFC-----------RPKCSQSCG 185
            ||..:.||  :.|.:..|:|                   |.:..|           :.:.::..|
Mouse    16 HGWGFKNG--IFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVCEFEGGRLATYKQLEAARKIG 78

  Fly   186 THEECVAPGQCDCSPGYRRTPDLGCQPVC--APDCGFGK-------------------CVAPNQC 229
            .|.         |:.|:.....:| .|:.  .|:|||||                   |..|:..
Mouse    79 FHV---------CAAGWMAKGRVG-YPIVKPGPNCGFGKTGIIDYGIRLNRSERWDAYCYNPHAK 133

  Fly   230 ECFAGFI--KR-------PNWNVCEAECYLNCENGLCESRYKCHCREGYRYDVNTTSCLPECSDN 285
            ||...|.  ||       ||.......||             .|.|..|...::.:....:...:
Mouse   134 ECGGVFTDPKRIFKSPGFPNEYDDNQVCY-------------WHIRLKYGQRIHLSFLDFDLEHD 185

  Fly   286 CGQGNGVCIAPGVCRCFRGY-EVHGAECRPKCESRFCGKYGRCVAPEICGCGE 337
            .|     |:|..| ..:..| :|||          |.|:|          ||:
Mouse   186 PG-----CLADYV-EIYDSYDDVHG----------FVGRY----------CGD 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
Tnfaip6NP_033424.1 Link_domain_TSG_6_like 36..128 CDD:239592 14/101 (14%)
CUB 135..244 CDD:395345 24/117 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..275
Blue background indicates that the domain is not in the aligned region.

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