DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and Tnfaip6

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_033424.1 Gene:Tnfaip6 / 21930 MGIID:1195266 Length:275 Species:Mus musculus


Alignment Length:248 Identity:48/248 - (19%)
Similarity:73/248 - (29%) Gaps:112/248 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HGRCYLNGTCVCHQNFVLDQ-------------------ETRQFC-----------RPKCSQSCG 185
            ||..:.||  :.|.:..|:|                   |.:..|           :.:.::..|
Mouse    16 HGWGFKNG--IFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVCEFEGGRLATYKQLEAARKIG 78

  Fly   186 THEECVAPGQCDCSPGYRRTPDLGCQPVC--APDCGFGK-------------------CVAPNQC 229
            .|.         |:.|:.....:| .|:.  .|:|||||                   |..|:..
Mouse    79 FHV---------CAAGWMAKGRVG-YPIVKPGPNCGFGKTGIIDYGIRLNRSERWDAYCYNPHAK 133

  Fly   230 ECFAGFI--KR-------PNWNVCEAECYLNCENGLCESRYKCHCREGYRYDVNTTSCLPECSDN 285
            ||...|.  ||       ||.......||             .|.|..|...::.:....:...:
Mouse   134 ECGGVFTDPKRIFKSPGFPNEYDDNQVCY-------------WHIRLKYGQRIHLSFLDFDLEHD 185

  Fly   286 CGQGNGVCIAPGVCRCFRGY-EVHGAECRPKCESRFCGKYGRCVAPEICGCGE 337
            .|     |:|..| ..:..| :|||          |.|:|          ||:
Mouse   186 PG-----CLADYV-EIYDSYDDVHG----------FVGRY----------CGD 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
Tnfaip6NP_033424.1 Link_domain_TSG_6_like 36..128 CDD:239592 14/101 (14%)
CUB 135..244 CDD:278839 24/117 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..275
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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