DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB1 and sdz-23

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_505091.1 Gene:sdz-23 / 186544 WormBaseID:WBGene00019066 Length:267 Species:Caenorhabditis elegans


Alignment Length:136 Identity:25/136 - (18%)
Similarity:36/136 - (26%) Gaps:69/136 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 VRNEHGACIHTCPIACQHGRCYLNGTCVCHQNFVLDQETRQFCRPKCSQSCGTHEECVAPGQCDC 198
            :.||:|..:.|.          :...|:           ..|..|||...|.:.|:|        
 Worm   115 ISNENGVSVFTS----------IRFECL-----------PSFYGPKCQYYCTSGEKC-------- 150

  Fly   199 SPGYRRTPDLGCQPVCAPDCGFGKCVAPNQCECFAGFIKRPNWNVCEAECYLNCENGLCESRYKC 263
                           ...:|...||...:||: |.|                        |..||
 Worm   151 ---------------SRDECPKRKCQNNSQCQ-FDG------------------------SESKC 175

  Fly   264 HCREGY 269
            .|:.||
 Worm   176 VCQSGY 181



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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