DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB1 and sdz-23

DIOPT Version :10

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_505091.1 Gene:sdz-23 / 186544 WormBaseID:WBGene00019066 Length:267 Species:Caenorhabditis elegans


Alignment Length:136 Identity:25/136 - (18%)
Similarity:36/136 - (26%) Gaps:69/136 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 VRNEHGACIHTCPIACQHGRCYLNGTCVCHQNFVLDQETRQFCRPKCSQSCGTHEECVAPGQCDC 198
            :.||:|..:.|.          :...|:           ..|..|||...|.:.|:|        
 Worm   115 ISNENGVSVFTS----------IRFECL-----------PSFYGPKCQYYCTSGEKC-------- 150

  Fly   199 SPGYRRTPDLGCQPVCAPDCGFGKCVAPNQCECFAGFIKRPNWNVCEAECYLNCENGLCESRYKC 263
                           ...:|...||...:||: |.|                        |..||
 Worm   151 ---------------SRDECPKRKCQNNSQCQ-FDG------------------------SESKC 175

  Fly   264 HCREGY 269
            .|:.||
 Worm   176 VCQSGY 181

Return to query results.
Submit another query.