DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB1 and F56B3.2

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_499983.2 Gene:F56B3.2 / 176902 WormBaseID:WBGene00018928 Length:432 Species:Caenorhabditis elegans


Alignment Length:385 Identity:86/385 - (22%)
Similarity:117/385 - (30%) Gaps:168/385 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 CSASSPDN--CR-NGFCRSP------GVCECFAEF--VRNEHG--------------ACIHTC-- 145
            |:..|..|  |. ||.|.:.      |.|.|...:  .|:|.|              .|...|  
 Worm    28 CNGKSALNGVCDINGDCENKGSICLRGKCRCHPHYTETRDEKGRLPKCAPLPAKIGARCSSKCRE 92

  Fly   146 PIACQHGRCYL---------NGTCVCHQNFVLDQETRQFCRPKCSQSCGTHEECVAP------GQ 195
            |:.|::|.|..         ||.|:              ...:....|..|.:|.:|      .|
 Worm    93 PLFCRNGECQCVQRGTTRVSNGECI--------------TTSRVGDRCSRHYDCTSPFSACVNSQ 143

  Fly   196 CDCSPGYRRTPDLGCQPVCAPDCGFGK-----CV-----------APNQCECFAGFIKRPNWNVC 244
            |.|..|   |..:|.:.|.|.:|.|||     ||           ..||..|       |...||
 Worm   144 CVCITG---TIQMGSRCVAAANCPFGKLPGQSCVRKSDPSLAFNIPSNQDNC-------PMGQVC 198

  Fly   245 ----EAE----CYLNCE-NGLCESRY----------KCHCREGYRYDVNTTS------------- 277
                |::    |.:.|. |...::||          ||.....|.|.::..|             
 Worm   199 ITAGESQVGHCCPVICPLNTTTDTRYSCDPDAAPALKCPSDSHYCYFLSDGSFSQAACCRRPCNA 263

  Fly   278 -----------CLPE------CSDN--CGQGNGVCIAPGVCRCFRGYEVHGA------------- 310
                       |:|.      |:.|  ||.|.|:....|.|:|.:.:  |.|             
 Worm   264 MAPNALYVDYHCMPRGQLNSACTSNAQCGGGEGMECMKGQCQCQQNF--HPAVDVLTNPLKNPSQ 326

  Fly   311 ECRPKCESRFCGKYGRCV--------------APEICGCGEGQQHCR------NGSCDDI 350
            .|...|||....|...|:              .|:..||..|:..||      ||.|.:|
 Worm   327 SCSRDCESENLSKDTSCMKAVPLNSLCFIQKQCPQNSGCYRGRCMCRCGFAAKNGKCVEI 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
F56B3.2NP_499983.2 EB 111..157 CDD:279949 13/62 (21%)
EB 266..312 CDD:279949 11/47 (23%)
EB 332..383 CDD:279949 13/50 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.