DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and pqn-25

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_741140.1 Gene:pqn-25 / 175759 WormBaseID:WBGene00004114 Length:672 Species:Caenorhabditis elegans


Alignment Length:417 Identity:87/417 - (20%)
Similarity:139/417 - (33%) Gaps:109/417 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GLTALLTLVAFPVQIKTDSTVSTELYGDIENTEYGDFESLSQTRERQQHLCHREVPSVFFQT--- 70
            |||.|.:...|...:......:...|....::.:|.....:.|  ...::|       .:.|   
 Worm    53 GLTPLFSNSNFNQPLTCTPQDACSCYSSSGSSRFGTICQYAST--YNNYIC-------CYSTNTQ 108

  Fly    71 --ERDSP-VRGNGSTIYFHRIEVCCAGYRRDPYANECVPD-----CSASSPDNCR------NGFC 121
              ...|| |..:|..:.......|.:||..:..|  |.|:     ||::..:.|.      ||.|
 Worm   109 CGSNSSPQVSASGQVVTCSTNTQCASGYTCNNGA--CCPNTNSNTCSSNGNNGCLAGQTMVNGQC 171

  Fly   122 RSP---------------------GVCECFAEFVRNEHGACIHTCPIACQHGRCYLNGTCVCHQN 165
            .:.                     .:|:|::.:| |.:..|:.:..:.||.|....|..|:    
 Worm   172 YNSVNIGSACQSTQQCLGGSQCQNNICQCYSGYV-NVNQQCVISNGLNCQLGTVSYNSQCI---- 231

  Fly   166 FVLDQETRQFCRPKCSQSCGTHEECVAPG-----QCDCSPGYRRTPDLGCQPVCAPDCGFGKCVA 225
                    ....|  .|:|.|..:|:...     .|.|:..||..... |.|:.:..|...:.:.
 Worm   232 --------TLASP--GQNCQTSSQCIDNSVCMNQMCTCNNNYRLVYGY-CVPITSSICQQTQTLV 285

  Fly   226 PNQCECFAGFIKRPNWNVCEAECYLN--CENG-LCESRYKCHCREG----YRYDVNTTSCLPECS 283
            .|||...         ::....|..|  |..| :|.|. .|.|..|    |.|.::::|  ..|:
 Worm   286 NNQCVLL---------SIVGETCIANQQCVGGAMCNSG-TCQCTNGATAMYGYCISSSS--SSCN 338

  Fly   284 DNCGQGNGVCI----APGVCRCFRGYEVHGAECRPK-CESRFCGKYGRCVAPEICGCGE------ 337
            .|....||:|.    ..|.| .|....::.|.|... |.|.||..  .|...::|...:      
 Worm   339 SNQVSINGMCYNTVQVGGSC-SFSQQCLNNAVCTNNICVSTFCSV--SCSTNQVCISNQCYNYVS 400

  Fly   338 ------GQQHCRNGSCDDIEHCSCPSG 358
                  |.|.|.:.|......|.||.|
 Worm   401 IGSQCVGSQQCLSNSQCISSICQCPQG 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
pqn-25NP_741140.1 EB 160..211 CDD:279949 8/51 (16%)
EB 219..270 CDD:279949 14/65 (22%)
EB 278..329 CDD:279949 14/60 (23%)
EB 341..>376 CDD:279949 8/35 (23%)
EB 384..435 CDD:279949 10/44 (23%)
EB 450..496 CDD:279949
EB 504..555 CDD:279949
EB 563..614 CDD:279949
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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