DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimB1 and D1044.7

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_498177.1 Gene:D1044.7 / 175758 WormBaseID:WBGene00017032 Length:400 Species:Caenorhabditis elegans


Alignment Length:336 Identity:79/336 - (23%)
Similarity:112/336 - (33%) Gaps:92/336 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 NECVPDCSASSPDNCRNGF-----CRSPGVCECFAEFVRNEHGACIHTCPIACQHGRCYLNGTCV 161
            ::|.|   ...|....|.|     |.....|.||:  |...:||       .|.:...|.|..| 
 Worm    17 SQCPP---GLIPLTSNNNFNQPLTCTPQDPCSCFS--VSARYGA-------ICHYSSNYNNYLC- 68

  Fly   162 CHQNFVLDQETRQFC----RPKCSQS-----CGTHEECVAPGQCD---CSPGYRRTPDLGCQPVC 214
            ||     .|.|:  |    .|:.|.|     |.|:.:|.:...|.   |.|   .|....|....
 Worm    69 CH-----SQNTQ--CGTNSSPQVSASGQVVTCFTNSQCASGYICSNGACCP---NTNSNTCSTTG 123

  Fly   215 APDCGFGKCVAPNQC--------------ECFAGFIKRPNWNVCEAECYLNCENGLCESRYKCHC 265
            .| |..|:.....||              :|..|  .:...|:|:      |.||......||.|
 Worm   124 TP-CFTGQISVGGQCFNSVNIGDRCQRSEQCLGG--SQCQNNLCQ------CPNGFANVNQKCAC 179

  Fly   266 REGYRYDVNTTSCL------------PECSDNCGQGNGVCIAPGVCRCFRGYEVHGAECRP---- 314
            :.|  ..:..:.|:            .:|.||....|.:|...|..|...||      |.|    
 Worm   180 QLG--TVLFNSQCITLASPGQNCQISSQCIDNSVCNNQMCSCNGNYRLVFGY------CVPFTNS 236

  Fly   315 KCESRFCGKYGRCVAPEICG--CGEGQQHCRNGSCDDIEHCSCPSGETHFIDRCLKADRLSQHLN 377
            ||:........:||...|.|  |...|| |..|:..:...|.|.:|.|.....|:.:.......|
 Worm   237 KCQQTQTLVNNQCVLLSIVGETCIANQQ-CVGGAMCNSGTCRCTNGATAMYGYCISSQSTVNPCN 300

  Fly   378 TSEKRKHFNRQ 388
            :::  .::|.|
 Worm   301 SNQ--VYYNGQ 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
D1044.7NP_498177.1 EB 126..177 CDD:279949 11/58 (19%)
EB 179..230 CDD:279949 12/58 (21%)
EB 238..289 CDD:279949 14/51 (27%)
EB 299..349 CDD:279949 3/13 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.