DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and Dlk1

DIOPT Version :9

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_038967531.1 Gene:Dlk1 / 114587 RGDID:619931 Length:416 Species:Rattus norvegicus


Alignment Length:225 Identity:63/225 - (28%)
Similarity:81/225 - (36%) Gaps:75/225 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 CQPVCAPDCGFGKCVAPNQCECFAGFIKRPNWN--VCEAECYLN--CENGLCESRYKCHCREGY- 269
            |.|.|.|..||  |.|.|.|.|      .|.|.  :|| :|..:  |.|||||..::|.|:||: 
  Rat    59 CDPACDPQHGF--CEADNVCRC------EPGWEGPLCE-KCVTSPGCVNGLCEEPWQCVCKEGWD 114

  Fly   270 ----RYDVNTTSCLPECSDNCGQGNGVCI----APGVCRCFRGYEVHGAECRPKC-----ESRFC 321
                ..|:...:..| |::     ||.|:    ....|.|..|:.  |.:|:.|.     ....|
  Rat   115 GKFCEIDIRACTSTP-CAN-----NGTCVDLEKGQYECSCTPGFS--GKDCQHKAGPCVINGSPC 171

  Fly   322 GKYGRCVAPE------ICGCGEG--------------QQHCRN-GSCDDIE---HCSCPSGETHF 362
            ...|.||..|      .|.|..|              ...|.| |.|.||.   .|.||:|   |
  Rat   172 QHGGACVDDEGRASHASCLCPPGFSGNFCEIVTNSCTPNPCENDGVCTDIGGDFRCRCPAG---F 233

  Fly   363 IDR-------------CLKADRLSQHLNTS 379
            :|:             ||......||...|
  Rat   234 VDKTCSRPVSNCASGPCLNGGTCLQHTQVS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
Dlk1XP_038967531.1 EGF_CA 121..158 CDD:238011 10/44 (23%)
EGF_CA 168..201 CDD:238011 8/32 (25%)
EGF_CA 208..238 CDD:238011 12/32 (38%)
EGF_CA 245..277 CDD:238011 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I5147
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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