DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimB1 and efemp1

DIOPT Version :10

Sequence 1:NP_001260452.1 Gene:NimB1 / 34813 FlyBaseID:FBgn0027929 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_068069082.1 Gene:efemp1 / 100332567 ZFINID:ZDB-GENE-130403-1 Length:506 Species:Danio rerio


Alignment Length:403 Identity:97/403 - (24%)
Similarity:144/403 - (35%) Gaps:91/403 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QIKTDSTVSTELYGDIENTEYGDFESLSQTRERQQHLCHREVPSVFFQTERDSPVRGNGSTIYFH 86
            |:...|:.||....|::::     .||:........|....:..|..|...:|        :.:.
Zfish    37 QLHQISSSSTHTAADLQHS-----SSLTPAEMWTVSLMMAALACVLSQEAEES--------VSYT 88

  Fly    87 RIEVCCAGYRRDPYANEC--VPDCSASSPDNCRNGF-C-RSPGVCECFAE----FVRNEHGACIH 143
            |   |..||..||:...|  :.:|...| |.|:.|. | ...|...|..:    |:..|:.|...
Zfish    89 R---CTEGYEYDPFKEVCTDIDECVLVS-DACKAGMKCINHYGGYLCLPQNAQIFINKENEASQS 149

  Fly   144 TCPIACQH----GRCYLNGTCVCHQNFVLDQETRQFCR--PKCSQ---SCGTHEECV---APGQC 196
            :..:...|    .|...||...|...|..||  ..:|.  .:|||   :||:.:.|.   ....|
Zfish   150 SDSVPQTHTETNHRSAANGGSQCSAGFTRDQ--HNYCHDVDECSQGLHTCGSDQICYNSRGSYSC 212

  Fly   197 DCSPGYRRTPDLGCQPVCAPDCGFGKCVAPNQCECFAGFIKRPNWNVCEAECYLNCENGLCESRY 261
            .|.|||:|..:              :||..|:|             :....|...|.|  ....|
Zfish   213 QCQPGYQRHGE--------------QCVDRNEC-------------LLSHYCMHRCVN--TAGSY 248

  Fly   262 KCHCREGYRYDVNTTSCLP--EC--SDNCGQGNGVCIAPGVCRCFRGYEV--HGAEC--RPKCE- 317
            .|.|.:||:...|..||:.  ||  |..|.......:...:|:|.:|||:  ....|  ..:|. 
Zfish   249 YCECNDGYQLASNNHSCVDVNECEVSQPCQHQCFNLLGSFICQCEQGYELGPDAVSCVDIDECSF 313

  Fly   318 SRFCGKYGRCVAPE---ICGCGEGQQHCRNGSCDDIEHCSCPSGETHFIDRCL----------KA 369
            |.:..:|. ||..|   .|.|.:|.|..|...|.||..|...:.|....:.|.          :.
Zfish   314 SSYMCQYA-CVNSEGGYSCTCPDGYQIHRTRMCQDINECETAAHECREDEMCWNYYGGHRCYPRN 377

  Fly   370 DRLSQHLNTSEKR 382
            ..|..::.|||.|
Zfish   378 PCLEPYVRTSENR 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimB1NP_001260452.1 None
efemp1XP_068069082.1 EGF_CA 186..226 CDD:238011 12/53 (23%)
vWFA <225..262 CDD:469594 12/51 (24%)
EGF_CA 267..301 CDD:214542 9/33 (27%)
EGF_CA 307..336 CDD:429571 8/29 (28%)

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