DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vajk3 and NEFH

DIOPT Version :10

Sequence 1:NP_609690.1 Gene:Vajk3 / 34812 FlyBaseID:FBgn0028544 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_066554.2 Gene:NEFH / 4744 HGNCID:7737 Length:1020 Species:Homo sapiens


Alignment Length:140 Identity:35/140 - (25%)
Similarity:44/140 - (31%) Gaps:21/140 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 PVVHEKRVPVEVKVPVPQ----PYEV--IRKVPVTVKEYVKVPVPVPQPYEVIRHEKVPVHVPVD 193
            ||..|.:.|.|.|.||.:    |.||  ..|.....||..|.|.....|      ||.....|..
Human   607 PVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSP------EKEEAKSPEK 665

  Fly   194 RPVPVEVPRPYPVPVAKPYPVYVEKAVNVQVPVHVDRPYPVYVKVPVVSHS---------VVKHA 249
            ...||:.....|.....|.....:.....:.||..:...|...|.||...:         |.:.|
Human   666 AKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEA 730

  Fly   250 PTVAVSSYPV 259
            .|...:..||
Human   731 KTPEKAKSPV 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vajk3NP_609690.1 None
NEFHNP_066554.2 Head 1..100
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..83
Filament 96..412 CDD:459643
Coil 1A 101..132
Linker 1 133..145
Coil 1B 146..244
Linker 12 245..266
Coil 2A 267..288
Linker 2 289..292
PTZ00121 <290..1014 CDD:173412 35/140 (25%)
Coil 2B 293..413
Tail 414..1020 35/140 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..1020 35/140 (25%)
30 X 6 AA repeats of K-S-P-[AEPV]-[EAK]-[AEVK] 525..826 35/140 (25%)
Blue background indicates that the domain is not in the aligned region.

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