DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vajk3 and nahoda

DIOPT Version :10

Sequence 1:NP_609690.1 Gene:Vajk3 / 34812 FlyBaseID:FBgn0028544 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_523815.2 Gene:nahoda / 37641 FlyBaseID:FBgn0034797 Length:1335 Species:Drosophila melanogaster


Alignment Length:101 Identity:25/101 - (24%)
Similarity:32/101 - (31%) Gaps:4/101 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 TITITKGIPVPVHVDRPYPVVHEKRVPVEVKVPVP--QPYEVIRKVPVTVKEYVKVPVPVPQPYE 179
            |.|:...:|.|.....|......|..|.....|.|  :|.......|.:..|....|.|..:|..
  Fly   314 TTTLEASVPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEPEP 378

  Fly   180 VIRHEKVPVHVPVDRPVPVEVPRP--YPVPVAKPYP 213
            ....|......|...|.|...|.|  .|.|.::|.|
  Fly   379 KSEPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEPEP 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vajk3NP_609690.1 None
nahodaNP_523815.2 LPMO_10 <52..162 CDD:460793
EGF_2 207..238 CDD:400365
DOMON_like 255..>297 CDD:472705
DOMON_DOH <593..693 CDD:187689
DoH 766..918 CDD:214768
Blue background indicates that the domain is not in the aligned region.

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