DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vajk2 and GGN

DIOPT Version :10

Sequence 1:NP_609689.3 Gene:Vajk2 / 34811 FlyBaseID:FBgn0032538 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_689870.3 Gene:GGN / 199720 HGNCID:18869 Length:652 Species:Homo sapiens


Alignment Length:262 Identity:64/262 - (24%)
Similarity:92/262 - (35%) Gaps:72/262 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SEEAP-KKAVETAEPAEKKQEKRGIGHGLGYGYGPSAGGAILGSGIGVGVPVAPAVAELPTQVHT 83
            |:.|| .:.....||....|..| :..|||..:..||      :..|:.||..|       |...
Human    20 SDRAPDSRRTSLVEPEMTSQAMR-LTRGLGVWFPGSA------TPPGLMVPREP-------QASP 70

  Fly    84 NTVVRTVQVPYQVERHVPYPVEKTVTYPVKVPVPQPYPVEKIVHVPVKQIVKVPVEVPQPYPVEK 148
            :|:..|::.|..|   :|.|.|...     |..|.|.|...::..|.|.      :.|...||.:
Human    71 STLPLTLERPSPV---MPPPEEAAA-----VSAPPPAPAGTLLPGPSKW------QKPAGTPVPR 121

  Fly   149 VIRV----------PVKIPVDRPYTVHVDKPYPVPVEKPVPYTVEKRVIHKVPVHVE--RPVPYK 201
            :.|:          |   |..||.     ||.|.|.:..|..|| .|...:.|..:|  :|.|  
Human   122 IRRLLEASHRGQGDP---PSLRPL-----KPPPPPRQLSVKDTV-PRAPSQFPPPLETWKPPP-- 175

  Fly   202 VAVPVPVH---VESHVKPAVAVTHTVAAAPAIISHGYSGHGISGYGISGHGISSYGSSSYGGSAH 263
               |:|..   .:..:.||:|   |.|:.|.....|....|           .:.|.:..|...|
Human   176 ---PLPSERQPADRRITPALA---TPASPPTESQAGPRNQG-----------QTAGRARGGAPPH 223

  Fly   264 GG 265
            .|
Human   224 AG 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vajk2NP_609689.3 rne <69..236 CDD:236766 45/181 (25%)
GGNNP_689870.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 5/18 (28%)
GGN 2..652 CDD:434857 64/262 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..237 54/229 (24%)
Interaction with GGNBP1. /evidence=ECO:0000250 123..486 31/131 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 251..273
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..473
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 488..576
Interactions with ZNF403/GGNBP2 and OAZ3. /evidence=ECO:0000250 491..652
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.