DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vajk1 and CG13840

DIOPT Version :10

Sequence 1:NP_609688.3 Gene:Vajk1 / 34809 FlyBaseID:FBgn0028938 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_651102.3 Gene:CG13840 / 42705 FlyBaseID:FBgn0039028 Length:466 Species:Drosophila melanogaster


Alignment Length:359 Identity:84/359 - (23%)
Similarity:138/359 - (38%) Gaps:101/359 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EEKKAEPEAKA--------AEAAASEDTTKSKRGLHHYE------------------DYHHHHVP 71
            ||.:.:|.|..        .|..::....:...|..|||                  |||...:.
  Fly   122 EEPRRDPSANIDFVINTANYEPNSAGYDVEPHHGEQHYESYAYRPRVQFATSLPGPSDYHFEQIS 186

  Fly    72 HFPVHEEKTLTVIKKVPVPVPIEKIVHVPVE---------KHIHVPVK-VKVPKPYPVIKHIP-- 124
            ::..:.::...|.:.       ::..|...|         |.:..|.. ||..:...:..|.|  
  Fly   187 NYRENRQREQEVEQH-------QQQQHQEQEDITSIYARLKELQTPANPVKRQQEESLSSHHPNR 244

  Fly   125 YEVKEIVKVPYEVPAPYPVEKQVHVPVHVHYDRPVPVKVHVPAPYPVEKKVHVPVKV-------- 181
            .:.:.:.:..|:.|....:: |.|:..|:...||..::      ||.:::.|..:.|        
  Fly   245 EQSQPLEQRHYQQPESRQLQ-QPHLQQHLQQKRPHALQ------YPQDQRHHQRLGVAQDQQMLY 302

  Fly   182 --------HVPAPYPVEKIVHYNVE-----------KHVHVDKPYPVE--KVVHYPVKVPVDKPV 225
                    .:||   :...||:..|           ||:.:.|..|:.  :..|.|.|..|...|
  Fly   303 SHKDSQIADLPA---ITTSVHHTPESSKAVAGLPLAKHIEITKSVPITHYQKQHVPFKQNVQVQV 364

  Fly   226 PHYIDKPVPHYVDKPVP--VPVIKKVPVP----VHVPYDRPVPVHVEKPVPYEVKVHVPAPYPVI 284
            |..:...:|    ||:|  :||.:.|.||    |.:|.:|..||.||:|:|:.|:..|  ||.| 
  Fly   365 PRTVIAAIP----KPMPIKIPVAQTVAVPQMQEVKIPIERVKPVPVERPIPFVVERRV--PYRV- 422

  Fly   285 KEVPVKVEKHVPYPVKIPVEKPVHVHIEKHVPEY 318
             |.||....:.|||||:||.:.|   :.|..|.|
  Fly   423 -EKPVVSPVYYPYPVKVPVVRTV---VHKQRPHY 452

Return to query results.
Submit another query.