| Sequence 1: | NP_001285914.1 | Gene: | Smg5 / 34804 | FlyBaseID: | FBgn0019890 | Length: | 1177 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038959679.1 | Gene: | Smg5 / 681012 | RGDID: | 1584731 | Length: | 1018 | Species: | Rattus norvegicus |
| Alignment Length: | 1281 | Identity: | 275/1281 - (21%) |
|---|---|---|---|
| Similarity: | 455/1281 - (35%) | Gaps: | 419/1281 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 37 ILSQEVKD------LYRSLYTASKQLDDAKRNVQSVGQLFQHEIEEKRSLLVQLCKQIIFKDYQS 95
Fly 96 VGKKVREVMWRRGYYEFIAFVKKNWHKQCQDAATAQENMQKLERFLCAGIFNYKRLSARMEEIYD 160
Fly 161 LDLKYLIDFSIISDGYISDMIGDTMESSHSGTHAVDKSLEAVSFALDTIHSSLLSLGDLHRYFLD 225
Fly 226 FR-IDSKLSISKEQVAKYYLEAFKLNPAIGMAQNQLGTLHYGQNHDLDSTYHYLYSLVCIIPFEL 289
Fly 290 SENNLNKLF---AKHTEYLERMDPEKLD------FNIEDFFARFYLIVDIF-----FFDKEVPDF 340
Fly 341 NALCHCVLIDLRKILC---------------------SQQLRVPEPSIFKIVSILFFCLSKLKMI 384
Fly 385 NSPKVYSLHAFLVAACSDLMDACIVSIEQTILARAQDNERFQAEYEERFQEFDTVVRKSRNEYKN 449
Fly 450 WLAAVGECERKDKKLMPRPHSLKDCSSDSRDSQHSGEEAKTQEAADGDKIGEAVSTRSSDEAKES 514
Fly 515 DLKTPLSCKSKRRGMRLRRRRRKIAQSDDSSCYDSESELDTDFYSDEEDYTDLSSNFDTDFSDID 579
Fly 580 AADPGEPCGEERYAAANYSKKERKAGGGGGGGVGGVVYSDNEDVVIEEEKIVYPNEVERRSNSQE 644
Fly 645 ADSEELLRSFEVLQLNFKSAEDAQSKPVAPPPVSFSEPPKKL---------------------VY 688
Fly 689 RNK--------YTKI------NPNIV--------------------------------------- 700
Fly 701 -----IDCLHNEPTIRALKMLFDWLRINPEILIGCYHSNPEFVHKIMKLLNYCNIDIFTRKVYFE 760
Fly 761 RDLLTTANVRDSLV-------------ELFDVRANVPLTEDFAFKNFDIFQSTQITLDWETIIRE 812
Fly 813 RVTPQEESILRIFKMVDFGFFICKQKKFNYRFCVKTRRFTETQKKKQREEKKGGGSRRRERRTAP 877
Fly 878 KTNRTKRNEGRTRRYSDRKNGIVRKSYTSNEEKDTVEECRKMPRKGYLRNRNAEKAAAVITSATG 942
Fly 943 TSVAGGTSASTTTNSVIEKLNLQSSSGADEERSEAKSKKCELMGKLWLQNEVETLEEELRDSPAH 1007
Fly 1008 VVMSPFVVVDSKALTEYNGIVKSLVRTKKCIVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQ 1072
Fly 1073 GNRHLRAQRD-NESQPLSLLKISRKMDRDASVFLQIAQFCNHLV----ANHADPHVSELQKSVVT 1132
Fly 1133 YLSGDNLHEKNRQQQNFSYTGILD-----SIPVRYAQIQSFYAKFK 1173 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Smg5 | NP_001285914.1 | EST1 | 99..222 | CDD:287360 | 36/122 (30%) |
| EST1_DNA_bind | 240..478 | CDD:287359 | 59/272 (22%) | ||
| PIN_Smg5 | 1012..1173 | CDD:189054 | 50/170 (29%) | ||
| Smg5 | XP_038959679.1 | EST1 | 78..189 | CDD:402133 | 30/110 (27%) |
| EST1_DNA_bind | 198..>412 | CDD:402132 | 58/249 (23%) | ||
| MSCRAMM_ClfB | <470..>573 | CDD:411414 | 21/102 (21%) | ||
| EST1_DNA_bind | <653..746 | CDD:402132 | 26/171 (15%) | ||
| PIN_Smg5-like | 857..1015 | CDD:350232 | 27/157 (17%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166354366 | |
| Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I11757 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG2162 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 129 | 1.000 | Inparanoid score | I4563 |
| OMA | 1 | 1.010 | - | - | QHG45620 | |
| OrthoDB | 1 | 1.010 | - | - | D102776at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0008183 | |
| OrthoInspector | 1 | 1.000 | - | - | oto97758 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107519 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR15696 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.770 | |||||