| Sequence 1: | NP_001285914.1 | Gene: | Smg5 / 34804 | FlyBaseID: | FBgn0019890 | Length: | 1177 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_839977.2 | Gene: | Smg5 / 229512 | MGIID: | 2447364 | Length: | 1017 | Species: | Mus musculus |
| Alignment Length: | 1231 | Identity: | 268/1231 - (21%) |
|---|---|---|---|
| Similarity: | 439/1231 - (35%) | Gaps: | 406/1231 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 43 KDLYRSLYTASKQLDDAKRNVQSVGQLFQHEIEEKRSLLVQLCKQIIFKDYQSVGKKVREVMWRR 107
Fly 108 GYYEFIAFVKKNWHKQCQDAATAQENMQKLERFLCAGIFNYKRLSARMEEIYDLDLKYLIDFSII 172
Fly 173 SDGYISDMIGDTMESSHSGTHAVDKSLEAVSFALDTIHSSLLSLGDLHRYFLDFR-IDSKLSISK 236
Fly 237 EQVAKYYLEAFKLNPAIGMAQNQLGTLHYGQNHDLDSTYHYLYSLVCIIPFELSENNLNKLF--- 298
Fly 299 AKHTEYLERMDPEKLD------FNIEDFFARFYLIVDIF-----FFDKEVPDFNALCHCVLIDLR 352
Fly 353 KILC---------------------SQQLRVPEPSIFKIVSILFFCLSKLKMINSPKVYSLHAFL 396
Fly 397 VAACSDLMDACIVSIEQTILARAQDNERFQAEYEERFQEFDTVVRKSRNEYKNWLAAVGECERKD 461
Fly 462 KKLMPRPHSLKDCSSDSRDSQHSGEEAKTQEAADGDKIGEAVSTRSSDEAKESDLKTPLSCKSKR 526
Fly 527 RGMRLRRRRRKIAQSDDSSCYDSESELDTDFYSDEEDYTDLSSNFDTDFSDIDAADPGEPCGEER 591
Fly 592 YAAANYSKKERKAGGGGGGGVGGVVYSDNEDVVIEEEKIVYPNEVERRSNSQEADSEELLRSFEV 656
Fly 657 LQLNFKSAEDAQSKPVAPPPVSFSEPPKKL---------------------VYRNK--------Y 692
Fly 693 TKI------NPNIV--------------------------------------------IDCLHNE 707
Fly 708 PTIRALKMLFDWLRINPEILIGCYHSNPEFVHKIMKLLNYCNIDIFTRKVYFERDLLTTANVRDS 772
Fly 773 LV-------------ELFDVRANVPLTEDFAFKNFDIFQSTQITLDWETIIRERVTPQEESILRI 824
Fly 825 FKMVDFGFFICKQKKFNYRFCVKTRRFTETQKKKQREEKKGGGSRRRERRTAPKTNRTKRNEGRT 889
Fly 890 RRYSDRKNGIVRKSYTSNEEKDTVEECRKMPRKGYLRNRNAEKAAAVITSATGTSVAGGTSASTT 954
Fly 955 TNSVIEKLNLQSSSGADEERSEAKSKKCELMGKLWLQNEVETLEEELRDSPAHVVMSPFVVVDSK 1019
Fly 1020 ALTEYNGIVKSLVRTKKCIVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHLRAQRD-N 1083
Fly 1084 ESQPLSLLKISRKMDRDASVFLQIAQFCNHLV----ANHADPHVSELQKSVVTYLSGDNLH 1140 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Smg5 | NP_001285914.1 | EST1 | 99..222 | CDD:287360 | 35/122 (29%) |
| EST1_DNA_bind | 240..478 | CDD:287359 | 59/272 (22%) | ||
| PIN_Smg5 | 1012..1173 | CDD:189054 | 44/134 (33%) | ||
| Smg5 | NP_839977.2 | EST1 | 77..187 | CDD:287360 | 29/109 (27%) |
| TPR repeat | 172..206 | CDD:276809 | 9/34 (26%) | ||
| EST1_DNA_bind | 197..>411 | CDD:287359 | 61/249 (24%) | ||
| TPR repeat | 211..241 | CDD:276809 | 10/29 (34%) | ||
| TPR repeat | 246..268 | CDD:276809 | 5/21 (24%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 406..562 | 33/155 (21%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 597..640 | 9/42 (21%) | |||
| PIN_SF | 856..1014 | CDD:301351 | 26/157 (17%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167850665 | |
| Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I12065 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG2162 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 129 | 1.000 | Inparanoid score | I4633 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG45620 | |
| OrthoDB | 1 | 1.010 | - | - | D102776at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0008183 | |
| OrthoInspector | 1 | 1.000 | - | - | oto94238 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107519 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR15696 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5305 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.800 | |||||