DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenG1A and SFC

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_196834.3 Gene:SFC / 831171 AraportID:AT5G13300 Length:827 Species:Arabidopsis thaliana


Alignment Length:704 Identity:174/704 - (24%)
Similarity:261/704 - (37%) Gaps:272/704 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 TTSRKSRRRSNLFIPSSSKKAD--KEKEPKSSELGS---------------GRSI---------- 453
            |.:::||.|||....:.::|..  |.:..:.|..||               |||.          
plant   221 TYAQQSRERSNYEQAALNEKMQEYKRQVDRESRWGSNGSNGSPNGDGIQAIGRSSHKMIDAVMQS 285

  Fly   454 -------PIKQGYLYKRSSKSLNKEWKKKYVTLCDDGRLTYHPSLHDYMDDVHGKEIPLQYVTVK 511
                   .|:||||.|||| :|..:||:::..|...|.|.|:                      :
plant   286 AARGKVQTIRQGYLSKRSS-NLRGDWKRRFFVLDSRGMLYYY----------------------R 327

  Fly   512 VPGQKPRGSKSIITNSALTSSLMANGQRAQNTLSDGIGCLTLAKDNQRKLSEKLSLLGAGSIAAG 576
            ....||.||.|           ..:|||..:.|..|:....|:.:|.                 |
plant   328 KQCSKPSGSGS-----------QLSGQRNSSELGSGLLSRWLSSNNH-----------------G 364

  Fly   577 AGGEPLKSNSSQQTSGDEGIAMSNSNSQTFIAGEVANAGNKLEAQTPNVKKRHRRMKSSSVKANE 641
            .||          ...::.:|....|                             :.:|::|. :
plant   365 HGG----------VHDEKSVARHTVN-----------------------------LLTSTIKV-D 389

  Fly   642 ADDND-GYEFYIVSLDSKQWHFEAANSEERDEWVAAVEQEIFKSL-------------------- 685
            ||.:| .:.|.|:| .:|.:..:|.::.::.:|:..:...|...|                    
plant   390 ADQSDLRFCFRIIS-PTKNYTLQAESALDQMDWIEKITGVIASLLSSQVPEQRLPGSPMGSGHHR 453

  Fly   686 -----QSIESSKTKQATSTDLAA-----------------MLAIR---------QRVPGNGFCVD 719
                 .|.|||:....|:.:...                 ..:||         ::|.||..|.|
plant   454 SASESSSYESSEYDHPTTEEFVCERSFLGYNERPSRSFQPQRSIRKGEKPIDALRKVCGNDKCAD 518

  Fly   720 CGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLD--DWPSPHLSVMLAIGNSLANSVW 782
            ||||.|:|||||||||:||||||||||||.||||||||.||  .|....:|:..|:||:.||:||
plant   519 CGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQALGNTFANTVW 583

  Fly   783 ES----------------NTRQRVKPTSQASRED----KERWVRSKYEAKEFLTPLGNGSSAHPS 827
            |.                :.:.||..|.:.|..|    ||:::::||..|.|:.  .:..|..|.
plant   584 EELLHSRSAIHFDPGLTVSDKSRVMVTGKPSYADMISIKEKYIQAKYAEKLFVR--RSRDSDFPQ 646

  Fly   828 PSPGQQLIEAVIRADIKSIVSILANCPSEV------TNAN---------VSARDVRTPLLL---- 873
             |..||:.:||...|.|::..::.|..::|      |:::         |..|..|..:||    
plant   647 -SAAQQMWDAVSGNDKKAVYRLIVNGDADVNYVYDQTSSSSLTLSRVILVPERPKREDVLLRLRN 710

  Fly   874 -------------------------ACAIGNLAIAQLLIWNGANIKHTDHEGRT----C------ 903
                                     ||...:|.:.:||:..|||:..:|..|:|    |      
plant   711 ELLDRTGSSSNISPEGSGGSSLLHCACEKADLGMVELLLQYGANVNASDSSGQTPLHCCLLRGKV 775

  Fly   904 ----LAYARAAQSLATAKSIKAA--AAAQAGTTIP---APAPPTNGGIPAPQYN 948
                |...|.|...|..:..|.|  .||::..|.|   |....|||      ||
plant   776 TIARLLLTRGADPEAMNREGKTALDIAAESNFTDPEVLALLSDTNG------YN 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281 48/277 (17%)
PH 454..>521 CDD:278594 19/66 (29%)
ArfGap 702..818 CDD:279720 64/163 (39%)
ANK <834..907 CDD:238125 25/130 (19%)
ANK repeat 834..866 CDD:293786 8/46 (17%)
Ank_5 859..907 CDD:290568 18/99 (18%)
ANK repeat 868..897 CDD:293786 11/57 (19%)
SFCNP_196834.3 BAR_SFC_plant 14..215 CDD:153290
PH 293..430 CDD:278594 44/228 (19%)
PH_ACAP 295..434 CDD:270070 44/230 (19%)
ArfGap 501..639 CDD:279720 62/139 (45%)
ANK 711..816 CDD:238125 23/104 (22%)
Ank_4 729..782 CDD:290365 13/52 (25%)
ANK repeat 729..759 CDD:293786 8/29 (28%)
ANK repeat 761..792 CDD:293786 7/30 (23%)
Ank_4 764..816 CDD:290365 13/51 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 114 1.000 Domainoid score I2005
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.