DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenG1A and smap1

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_021336343.1 Gene:smap1 / 777731 ZFINID:ZDB-GENE-060920-2 Length:483 Species:Danio rerio


Alignment Length:336 Identity:90/336 - (26%)
Similarity:139/336 - (41%) Gaps:83/336 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   703 AMLAIRQRVPGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDDWPSPHL 767
            |:|:...|...|.:|.||.|..|.|||.||||.:||.|:|:|||||.|||:|:|:.||.|....:
Zfish    19 AILSKMLREDDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQI 83

  Fly   768 SVMLAIGNSLANSVWESNTRQ--RVKPTSQASREDKERWVRSKYEAKEFLT------PLGNGSSA 824
            ..:.::||:.|..::|::..:  |...|.||    .|.::|.|||.|::..      .:.:..:|
Zfish    84 QSVQSMGNTKARQLYEAHLPENFRRPQTDQA----VEFFIRDKYERKKYYDKNSVNGAIKSSDAA 144

  Fly   825 HPS-PSPGQQLIE---------------------------AVI---RAD--IKSIVSILANCPSE 856
            .|| .||..|..|                           ||:   |.|  |.|.:|     |.:
Zfish   145 LPSVSSPSSQAAEKSKLEKEREKKKEEKKREKDTDKENKPAVLEKKREDNQIDSRIS-----PKK 204

  Fly   857 VTNANVSARDVRTPLLLACAIG-----------NLAIAQLLIWNGANIKHTDHEGRTCLAYARAA 910
            .....:....:..|.:.:.:.|           :|.|...::.|..    ..:...:.::.::||
Zfish   205 SAEPAIDLLGLDAPTVGSASSGAGTSSAAPISDDLDIFGPMVSNPL----PSNSNSSQVSSSKAA 265

  Fly   911 QSLATAKSIKAAAAAQAGTTIPAPA-------PPTNGGIPAPQYNVEDTTALVELLEGLGCPEAA 968
            .| |.|.|...|.|...||...|||       ..|:|...|     ||:..     :.|......
Zfish   266 GS-AQASSAGGAVAGATGTGSAAPAQGDLDLFSETSGNSKA-----EDSAK-----KPLSKDSIL 319

  Fly   969 PLTASGTLPRR 979
            .|..|.|:|::
Zfish   320 SLYGSSTVPQQ 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281
PH 454..>521 CDD:278594
ArfGap 702..818 CDD:279720 47/122 (39%)
ANK <834..907 CDD:238125 14/115 (12%)
ANK repeat 834..866 CDD:293786 9/63 (14%)
Ank_5 859..907 CDD:290568 5/58 (9%)
ANK repeat 868..897 CDD:293786 5/39 (13%)
smap1XP_021336343.1 ArfGap 18..132 CDD:307528 47/116 (41%)
Med15 <329..>466 CDD:312941 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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