DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenG1A and Arap1

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_006508249.1 Gene:Arap1 / 69710 MGIID:1916960 Length:1452 Species:Mus musculus


Alignment Length:693 Identity:161/693 - (23%)
Similarity:243/693 - (35%) Gaps:189/693 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 PLP-------PQVQPARPTT----PQGNRLGLAPYQAPTNGQRGQ---QQLPLRMSADFAQAEQK 356
            |||       |.|.|..|.|    ||.:.|.......|:...|.|   .:.|..:...|.|.   
Mouse   143 PLPAKRHLVEPSVPPVPPRTGPPYPQASLLAKEELLLPSVSPRSQPEPAETPSTLLPAFPQG--- 204

  Fly   357 LWSLQAASSSTI-----------------NENNNITKYNPGAANSLQGDCSQVQLRDPRDLAP-- 402
              .||..|....                 ::.:::.:..|||..|:......:..|.||.:..  
Mouse   205 --PLQPPSPPPCPPVIPPKPPRLLPEFDDSDYDDVPEEGPGAPASVMTKEEPLPSRVPRAVRVAS 267

  Fly   403 --PPGKELPTPTST---------------PTTSRKSRRRSNLFIPSSSKKADKEKEPKSSELGSG 450
              ..|:||....|.               ||:......||  .||      |....|.....|..
Mouse   268 LLSEGEELSGDDSEDDDDHAYEGIPNGGWPTSGLNPPLRS--LIP------DLPLHPMDELPGGP 324

  Fly   451 RSIP--IKQGYLYKRSSKSLNKEWKKKYVTLCDDGRLTYHPSLHDYMDDVHGKE-IPLQYVTVKV 512
            ..|.  ||.|:|.|...:. :..::|::|.| |...|.|    .|...|.:.|. :|:..:....
Mouse   325 TPITPVIKAGWLDKNPPQG-SYIYQKRWVRL-DADYLRY----FDSNKDAYSKRFVPVACICRVA 383

  Fly   513 P--GQKPRGSKSIITNSALTSSLMANGQRAQNTLSDGIGCLTLAKDNQRKLSEKLS--LLGAGSI 573
            |  .||    ..:|||:. |.:..|.....:|.....:         |:.:.|..:  .|.:.|:
Mouse   384 PIGDQK----FEVITNNR-TFAFRAESDVERNEWMQAL---------QQAVVEHRARFRLSSASV 434

  Fly   574 AAGAGGEPLKSNSSQQTSGDEG---IAMSNSNSQTFIAGEVANAG---NKLEAQTPNVKKRHRRM 632
            ....|.|......|.:..|.:.   :|::....|.:...|..:.|   ..::....|||:..|| 
Mouse   435 LGVRGSEQPDRAGSLELRGFKNKLYVAVTGDKVQLYKNLEEFHLGIGITFIDMNVGNVKEVDRR- 498

  Fly   633 KSSSVKANEADDNDGYEFYIVSLDSKQWHFEAANSEERDEWVAAVEQEIFKSLQSIESSKTKQAT 697
                    ..|....|..:..|.||:.         |:::|:.|::..|.::|.:.|.::...|.
Mouse   499 --------SFDLTTPYRIFSFSADSEL---------EKEQWLEAMQGAIAEALSTSEVAERIWAA 546

  Fly   698 STDLAAMLAIRQRVPGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDD- 761
            :.              |.||.||||..|:|||:||.|::|..|:|.||.||:.:||||||.:|. 
Mouse   547 AP--------------NRFCADCGAAQPDWASINLCVVICKRCAGEHRGLGAGVSKVRSLKMDRK 597

  Fly   762 -WPSPHLSVMLAIGNSLANSVWESNTRQRVKPTSQASREDKERWVRSKYEAKEFLTPLGNGSSAH 825
             |....:.:.|.:||...|..|.:|.     |.|:|                           ..
Mouse   598 VWTEALIQLFLHLGNGPGNHFWAANV-----PPSEA---------------------------LE 630

  Fly   826 PSPSPGQQL--IEAVIRADIKSIVSILANCPSEVTNANVSARDVRTPLLLACAIGNLAIAQLLIW 888
            ||.|||.:.  :||..|.........|.....|:..|          |..|....:||..|.|:.
Mouse   631 PSSSPGARRYHLEAKYREGKYRRYHPLFGNQEELDKA----------LCAAVTTTDLAETQALLG 685

  Fly   889 NGANIKHTDHEGRTCLAYARAAQSLATAKSIKAAAAAQAGTTI 931
            .||        |.:|.:...||.:       ..|.|.|||.|:
Mouse   686 CGA--------GVSCFSGDPAAPT-------PLALAEQAGQTL 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281 51/247 (21%)
PH 454..>521 CDD:278594 18/71 (25%)
ArfGap 702..818 CDD:279720 38/117 (32%)
ANK <834..907 CDD:238125 16/74 (22%)
ANK repeat 834..866 CDD:293786 6/33 (18%)
Ank_5 859..907 CDD:290568 11/47 (23%)
ANK repeat 868..897 CDD:293786 8/28 (29%)
Arap1XP_006508249.1 SAM_Arap1,2,3 6..68 CDD:188889
PH1_ARAP 331..422 CDD:270073 25/110 (23%)
PH2_ARAP 438..527 CDD:270074 21/106 (20%)
ArfGap_ARAP 537..652 CDD:350066 48/160 (30%)
PH3_ARAP 745..851 CDD:270076
PH-like 864..954 CDD:388408
RhoGAP_ARAP 959..1137 CDD:239850
RA_ARAP1 1173..1265 CDD:340746
PH5_ARAP 1265..1404 CDD:270079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.