DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenG1A and acap1

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_001074048.1 Gene:acap1 / 561771 ZFINID:ZDB-GENE-070112-1242 Length:757 Species:Danio rerio


Alignment Length:783 Identity:163/783 - (20%)
Similarity:258/783 - (32%) Gaps:291/783 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 LVGTQDAISERNPRVIDDTRARKLASDLKRCSYYETCATYGLNVERVFQDACQKI---LSQRLPL 307
            :|..|:.:.|...:.:.......:..|:||..          :|.:.|:.:.:.:   ||:....
Zfish    90 IVSAQEELIETTQKDVKLKLQNFVKDDVKRFK----------DVRKEFERSSENLEAALSRNAQA 144

  Fly   308 P----PQVQPARPT---TPQGNRLGLAPYQAPTNGQRGQQQLPLRMSADFAQAEQKLWSLQA--- 362
            |    .:|:.|...   ..:..|.|...|....|      .:..|...:..||...|...||   
Zfish   145 PRGKQHEVEEASNNLLIARRAFRSGALDYVLQIN------VIESRKKTEILQAMLSLIQAQALFF 203

  Fly   363 -ASSSTINENNNITKYNPGAANSLQGDCSQVQL---RDPRDLAPPPGKELPTPTSTPTTSRKSRR 423
             .|..::.|..|..|       .|..:.:|:.|   ||.||:....|                  
Zfish   204 QQSHQSLAELENYRK-------ELHDENAQLVLNSARDKRDMEQRHG------------------ 243

  Fly   424 RSNLFIPSSSKKADKEKEPK----SSELGSGRSIPIKQGYLYKRSSKSLNKEWKKKYVTLCDDGR 484
                    :.||.|...:..    |.:..:|.::   :||||||:|.:. |.|.:::.:: ...:
Zfish   244 --------AVKKKDVSYDDSIMDFSPDAPNGIAM---EGYLYKRASNAF-KTWSRRWFSI-QKNQ 295

  Fly   485 LTYHPSLHDYMDDVHGKEI-----PLQYVTVKVPGQKPRGSKSIITNSALTSSLMANGQRAQNTL 544
            |.|...        |.::|     .|:..|||...::.|.....:.:.:.:..|.|:.:|.|.:.
Zfish   296 LVYQKK--------HNEQITVVVEDLRLCTVKPCSEQDRRFCFEVVSPSKSCLLQADSERQQQSW 352

  Fly   545 SDGI-----GCLTLAKDNQRKLSEKLSLLGAGSIAAGAGGEPLKSNSSQQTSGDEGIAMSNSNSQ 604
            ...:     ......:|:.....::.|.:..||:.. :||||                       
Zfish   353 ISAVQNSIASAFQERRDDNHSSRDRCSSVSVGSVRL-SGGEP----------------------- 393

  Fly   605 TFIAGEVANAGNKLEAQTPNVKKRHRRMKSSSVKANEADDNDGYEFYIVSLDSKQWHFEAANSEE 669
                                                                      ||...|.
Zfish   394 ----------------------------------------------------------EACVREA 400

  Fly   670 RDEWVAAVEQEIFKSLQSIESSKTKQATSTDLAAMLAIRQRVPGNGFCVDCGAPNPEWASLNLGV 734
            .:|                                   .|.:.||..|.|||.|.|:|||:|||:
Zfish   401 LEE-----------------------------------VQAISGNSQCCDCGEPGPDWASINLGI 430

  Fly   735 LMCIECSGVHRNLGSHISKVRSLGLDDWPSPHLSVMLAIGNSLANSVWESNTRQRV--KPTSQAS 797
            .:||.|||:||:||.|.||||||.||.|....:.:|..:||:..|.::|:...:..  ||...:.
Zfish   431 TLCITCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNTAINKIYEARIEEITIKKPHPSSP 495

  Fly   798 REDKERWVRSKYEAKEF------------------------------------------------ 814
            |:|||.|:||||..|:|                                                
Zfish   496 RQDKESWIRSKYVEKKFIHKLPETGRGQILRRSSARRNRSTTEDKPCTRPALKPKPGRVTLPRLT 560

  Fly   815 -LTP---LGNGSSAHPSPS---------PGQQLIEAVIRADIKSIVSILANCPSEVTNANVSARD 866
             |||   :.|.|.:|...:         ||..|..:........:...||: .::|...|| |.|
Zfish   561 GLTPSDIMKNNSGSHKDNNEEEDLSGLHPGALLYRSASMQHFPLMADALAH-GADVNWVNV-AED 623

  Fly   867 VRTPLLLACAIGNLAIAQLLIWNGANIKHTD--------------HEGRTCLAYARAAQSLATAK 917
            .:|||:.|....:||..:.|:.||||:...|              |.|..||...|.|.  ..||
Zfish   624 SKTPLIQAVIANSLAACEFLLQNGANVNQVDSNGRGPLHHATILGHTGLVCLFLKRGAD--YNAK 686

  Fly   918 SIK 920
            .|:
Zfish   687 DIE 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303 8/53 (15%)
RAS 144..295 CDD:214541 8/48 (17%)
PH_AGAP 451..686 CDD:241281 34/244 (14%)
PH 454..>521 CDD:278594 18/71 (25%)
ArfGap 702..818 CDD:279720 55/169 (33%)
ANK <834..907 CDD:238125 24/86 (28%)
ANK repeat 834..866 CDD:293786 7/31 (23%)
Ank_5 859..907 CDD:290568 20/61 (33%)
ANK repeat 868..897 CDD:293786 11/28 (39%)
acap1NP_001074048.1 BAR 18..217 CDD:299863 26/142 (18%)
PH_ACAP 269..365 CDD:270070 22/108 (20%)
PH 269..361 CDD:278594 22/104 (21%)
ArfGap 398..516 CDD:279720 54/152 (36%)
ANK 583..709 CDD:238125 31/111 (28%)
Ank_2 593..687 CDD:289560 27/97 (28%)
ANK repeat 623..654 CDD:293786 12/30 (40%)
ANK repeat 656..687 CDD:293786 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R258
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.