DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenG1A and arap3

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_687312.3 Gene:arap3 / 558931 ZFINID:ZDB-GENE-091019-1 Length:1664 Species:Danio rerio


Alignment Length:768 Identity:169/768 - (22%)
Similarity:276/768 - (35%) Gaps:237/768 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 SERNPRVID------DTRARKLASDLKRCSYYETCATYGLNVERVFQDACQKILSQRLPLPPQVQ 312
            |.::|.|||      .|...|.|::.|:.....:.:...|:.|            ...|||    
Zfish   168 SSQDPVVIDSSSLSSSTDTVKTATESKKGHLEPSLSCTALSPE------------SEGPLP---- 216

  Fly   313 PARPTTPQGNRLGLAPYQAPTNGQRGQQQL---PLRMSADFAQAEQKLWSLQAASSSTINENNNI 374
               |..|:.|| |:.|  :......||::|   ||....|            :.||...:...| 
Zfish   217 ---PVPPRLNR-GIPP--STFRRMSGQERLSTPPLCTPPD------------SPSSYQCSPFTN- 262

  Fly   375 TKYNPGAANSLQGDCSQVQLRD----------------PRDLAPPPGKELPTPT----------- 412
               .||:..|  ..||.:::..                .|.:..||.::.|:|:           
Zfish   263 ---TPGSPPS--PPCSGLEMVSNEIYCGTLPDTPHVFWSRSVPVPPPRQEPSPSTENHSTLEKSN 322

  Fly   413 ---STPTTSRKSRRRSNLFIP-------------------SSSKKADKEKEPKSSELG------- 448
               |:..||..:....::..|                   |.||:....||.|..:.|       
Zfish   323 SSESSKRTSASAEEDDDMINPYCETVFHSKRQYQHSEVERSESKEKTSNKEDKLRDHGHHNHSWL 387

  Fly   449 -------------------------------------------SGRSIPIKQGYLYKRSSKSLNK 470
                                                       |.|:.||..|:|.|.|.:. |.
Zfish   388 KRLDSPGYCTVGESSHSFSLPHNLCSSEADEDIISPYASFTSLSERAAPILSGWLDKLSPQG-NY 451

  Fly   471 EWKKKYVTLCDDGR-LTYHPSLHD-YMDDVHGKEIPLQYVTVKVPGQKPRGSKSIITNSALTSSL 533
            .::|:||..  ||: |.|..|..| |...|    |||..:.:   .:..:.:|..|..|..|...
Zfish   452 VFQKRYVKF--DGKNLMYFGSEKDAYPKGV----IPLAAIQM---ARLAKDNKFEIVTSHRTFVF 507

  Fly   534 MANGQRAQNTLSDGIGCLTLAKDNQRKLSEKLSL----LGAGSIAAGAGGEPLKSNSSQQTSGDE 594
                 ||.|.:.....|.||    |.::.|:|..    .|.||....:|...||...|:..:   
Zfish   508 -----RADNDVQRSKWCSTL----QERVKEQLVFGRPRFGPGSHCQKSGFLELKGTKSKIYT--- 560

  Fly   595 GIAMSN----SNSQTFIAGEVANAGNKLEAQTPNVKKRHRRMKSSSVKANEADDNDGYEFYIVSL 655
            .|.|..    .:.|.|..|.....   :||:...::                 |..|..|.::: 
Zfish   561 AIIMEQIWLYKSEQCFKNGIGITV---IEARGATIR-----------------DGKGKSFDLIT- 604

  Fly   656 DSKQWHFEAANSEERDEWVAAVEQEIFKSLQSIESSKTKQATSTDLAAMLAIRQRVPGNGFCVDC 720
            ..|.:.|.|....|:.:|:.|:::.|.::|...|.::...:..:              |..|.||
Zfish   605 PYKTFSFTAETDREKRDWMEALQESIAETLSDYEVAEKIWSNRS--------------NKICADC 655

  Fly   721 GAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDD--WPSPHLSVMLAIGNSLANSVWE 783
            .|.||:|||:||.|::|..|:|.||.||:.:|||:||.||.  |.:..:.:.:.:||..||..|.
Zfish   656 KAINPDWASINLCVVICKNCAGQHRGLGTMVSKVQSLKLDTSVWSNEIVQLFIMLGNDRANEFWA 720

  Fly   784 SNTRQRVKPTSQASREDKERWVRSKYEAKEFLTPLGNGSSAHPSPSPGQQLIEAVIRAD-----I 843
            :......:....|:.|.:..::..||:...:..|       |||.|..::|::|:..|.     :
Zfish   721 ARLPVSEELDCDATPEQRREFISHKYKEGRYRHP-------HPSFSSQEELLKALCTAVTEQNLL 778

  Fly   844 KSIVSILANC-PSEVTNAN-----VSARDVRTPLLLACAIGNLAIAQLLIWNG 890
            |::..|.|.. .:.:.:||     ||.....|....:|....  |.|.::::|
Zfish   779 KTVTQIFAEAEAARLADANGNDKRVSPHYSYTQSADSCVYDE--IMQPILYSG 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303 11/51 (22%)
RAS 144..295 CDD:214541 11/46 (24%)
PH_AGAP 451..686 CDD:241281 59/244 (24%)
PH 454..>521 CDD:278594 21/68 (31%)
ArfGap 702..818 CDD:279720 37/117 (32%)
ANK <834..907 CDD:238125 15/68 (22%)
ANK repeat 834..866 CDD:293786 10/42 (24%)
Ank_5 859..907 CDD:290568 9/37 (24%)
ANK repeat 868..897 CDD:293786 5/23 (22%)
arap3XP_687312.3 SAM_Arap1,2,3 8..70 CDD:188889
SAM 9..70 CDD:197735
PH 436..527 CDD:278594 32/109 (29%)
PH1_ARAP 437..529 CDD:270073 31/110 (28%)
PH2_ARAP 538..627 CDD:270074 23/112 (21%)
PH 545..631 CDD:278594 20/109 (18%)
ArfGap 638..754 CDD:279720 38/129 (29%)
PH3_ARAP 824..937 CDD:270076 1/6 (17%)
PH 825..936 CDD:278594 1/5 (20%)
PH-like 950..1045 CDD:302622
PH 954..1045 CDD:278594
RhoGAP_ARAP 1050..1228 CDD:239850
RA 1261..1355 CDD:279168
PH5_ARAP 1357..1477 CDD:270079
PH 1369..1469 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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