DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenG1A and smap2

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_001038260.1 Gene:smap2 / 556132 ZFINID:ZDB-GENE-060503-374 Length:418 Species:Danio rerio


Alignment Length:365 Identity:91/365 - (24%)
Similarity:151/365 - (41%) Gaps:83/365 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   686 QSIESSKTKQATSTDLAAMLAIRQRVPGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSH 750
            :|::.....||.   |.::|.:.:    |.||.||.|..|.|||.|||:.:||.|:|:|||||.|
Zfish     4 RSVKDIDRYQAV---LTSLLTLEE----NKFCADCYAKGPRWASWNLGIFICIRCAGIHRNLGVH 61

  Fly   751 ISKVRSLGLDDWPSPHLSVMLAIGNSLANSVWES---NTRQRVKPTSQASREDKERWVRSKYEAK 812
            ||:|:|:.||.|....:..:..:||:.|..::|:   ...||.: |.||:    |.::|.||:.|
Zfish    62 ISRVKSVNLDQWTQEQIQSVQEMGNAKARRLYEAFLPECFQRPE-TDQAA----EIFIRDKYDKK 121

  Fly   813 EFL----------------------------------------TPLGNGSSAHP-------SPSP 830
            :::                                        ||.....|.:.       :|.|
Zfish   122 KYMDKCIDIQSFRKEKSETVTKEAPVVFEKMKLKKDESQQFKSTPKKQSQSVNDLLGLDALAPQP 186

  Fly   831 GQQLIEAVIRADIKSIVSILANCPSEVTNANVSARDVRTPLLLACAIGNLAIA---QLLIWNGAN 892
              .:......|:|...:.:.::.|:.|:|:| |||.  ||...:...|.:|.:   .|.::....
Zfish   187 --PVTNGKPSAEISPALDLFSSLPAAVSNSN-SARS--TPSSGSMPTGRVAASVPENLSLFLDPP 246

  Fly   893 IKHTDHEGRTCLAYARAAQSLATAKSIKAAAAAQAGTTIPAPAPPTNGGIPAPQYNVEDTTALVE 957
            .|..|...:..   ..:..||.::.:.:...||.||..:.|   ...|.:||..|.....   :.
Zfish   247 TKSEDSGKKLS---KDSILSLYSSTAPQTNMAAHAGMYMGA---TQMGYVPAAGYGQYQA---LG 302

  Fly   958 LLEGLGCPEAAP----LTASGTLPRRRDTLGTPYEKSVSG 993
            ..:|:..|..||    :..:|.:|:.......||...|.|
Zfish   303 AQQGMMGPMMAPHMNIVGQAGVMPQTGAAAAPPYMAGVQG 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281 91/365 (25%)
PH 454..>521 CDD:278594
ArfGap 702..818 CDD:279720 46/158 (29%)
ANK <834..907 CDD:238125 16/75 (21%)
ANK repeat 834..866 CDD:293786 8/31 (26%)
Ank_5 859..907 CDD:290568 12/50 (24%)
ANK repeat 868..897 CDD:293786 6/31 (19%)
smap2NP_001038260.1 COG5347 13..>275 CDD:227651 71/281 (25%)
ArfGap 13..115 CDD:279720 44/113 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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