DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenG1A and Agap1

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_038939665.1 Gene:Agap1 / 316611 RGDID:1309244 Length:1428 Species:Rattus norvegicus


Alignment Length:966 Identity:409/966 - (42%)
Similarity:520/966 - (53%) Gaps:202/966 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 DSFVNSQEWTISRSVPDLRLGIVGSLNSGKSALVHRYLTGSYMQEESPE----GGRFKKEVFIDG 186
            |:||||||||:|||||:|::||||:|.|||||||||||||:|:||||||    |||||||:.:||
  Rat   544 DAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEDMDAGGRFKKEIVVDG 608

  Fly   187 QSYLLLIRDEGGAPEMQFAGWVDAVIFVFSLENEGSFNTVYNYYTKMAHFRNGQEIPMILVGTQD 251
            ||||||||||||.||.|||.||||||||||||:|.||.|||:||::||::||..|||::||||||
  Rat   609 QSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEDEISFQTVYHYYSRMANYRNTSEIPLVLVGTQD 673

  Fly   252 AISERNPRVIDDTRARKLASDLKRCSYYETCATYGLNVERVFQDACQKILSQRLPLPPQVQPARP 316
            |||..|||||||.|||||::|||||:||||||||||||||||||..|||::.|            
  Rat   674 AISSTNPRVIDDVRARKLSNDLKRCTYYETCATYGLNVERVFQDVAQKIVATR------------ 726

  Fly   317 TTPQGNRLGLAPYQAPTNGQRGQQQLPLRMSADFAQAEQKLWSLQAASSSTINENNNITKYNPGA 381
               :..:|.:.|.::..|.       |...|...||..      ....|.|.|...:::.|:...
  Rat   727 ---KKQQLSIGPCKSLPNS-------PSHSSVCSAQVS------AVHISQTSNGGGSLSDYSSSV 775

  Fly   382 ANSLQGDCSQVQLRDPRDLAPPPGKELPTPTSTPTTSRKSRRRSNLFIPSSSKKADKEK---EPK 443
            .::  ...||.:||    :..||....|||     ..::|:||||||........||||   |.:
  Rat   776 PST--PSTSQKELR----IDVPPTANTPTP-----VRKQSKRRSNLFTSRKGSDPDKEKKGLESR 829

  Fly   444 SSELGSGRSIPIKQGYLYKRSSKSLNKEWKKKYVTLCDDGRLTYHPSLHDYMDDVHGKEIPLQYV 508
            :..:||||:||||||.|.|||.||||||||||||||||:|.|||||||||||.:||||||.|...
  Rat   830 ADSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHDYMQNVHGKEIDLLRT 894

  Fly   509 TVKVPGQKPRGSKSIITNSALTSSLMANG---QRAQNTLSDGIGCLTLAKDNQRKLSEKLSLLGA 570
            ||||||::|..:.|.   .|..||...||   ..:...:|...|.:|.|..:|  ::..:||:..
  Rat   895 TVKVPGKRPPRATSA---CAPISSPKTNGLAKDMSSLHISPNSGNVTSASGSQ--MASGISLVSF 954

  Fly   571 GSIAAGAGGEPLKSNSSQQTSGDEGIAMSNSNSQTFIAGEVANAG-NKLEAQTPNV--------- 625
            .|...|........:|:.|.|  :...::||...:..:|..|:.| ......:|::         
  Rat   955 NSRPDGMHQRSYSVSSADQWS--DATVIANSAISSAFSGSAADTGLGDSVCSSPSISSSTSPKLD 1017

  Fly   626 --------KKRHRRMKS------------------------------------------------ 634
                    :|:|||.||                                                
  Rat  1018 PPPSPHANRKKHRRKKSTSNFKADGLTGTAEGSHSHSGLRLRDPVAWRPGDLHPQFHTSLGQKRA 1082

  Fly   635 -----------------------------SSVKANEADDNDGYEFYIVSLDSKQWHFEAANSEER 670
                                         ||...|..:..:..||.||||..:.|||||...|||
  Rat  1083 PRPHLGSFWVSAKRKAWKLNRVGSLRNIYSSSSTNTEEQEENLEFIIVSLTGQTWHFEATTYEER 1147

  Fly   671 DEWVAAVEQEIFKSLQSIESSKTK-QATSTDLAAMLAIRQRVPGNGFCVDCGAPNPEWASLNLGV 734
            |.||.|:|.:|..||||.||||.| :.||...|..|...:.:.||..||||...||.|||||||.
  Rat  1148 DAWVQAIESQILASLQSCESSKNKSRLTSQSEAMALQSIRNMRGNSHCVDCDTQNPNWASLNLGA 1212

  Fly   735 LMCIECSGVHRNLGSHISKVRSLGLDDWPSPHLSVMLAIGNSLANSVWESNTRQRVKPTSQASRE 799
            ||||||||:|||||:|:|:||||.|||||...:.||.:|||.|||||||..::.|.||:..::||
  Rat  1213 LMCIECSGIHRNLGTHLSRVRSLDLDDWPMELIKVMSSIGNELANSVWEEGSQGRTKPSLDSTRE 1277

  Fly   800 DKERWVRSKYEAKEFLTPLGNGSSAHPSP--SPGQQLIEAVIRADIKSIVSILANCPSEVTNANV 862
            :||||:|:|||.|.||.||       |..  |.||||:.|....|:::::.:||:...:..|...
  Rat  1278 EKERWIRAKYEQKLFLAPL-------PCTEFSLGQQLLHATAEEDLRTVILLLAHGSRDEVNETC 1335

  Fly   863 SARDVRTPLLLACAIGNLAIAQLLIWNGANIKHTDHEGRTCLAYARAAQSLATAKSIKAAAAAQA 927
            ...|.||.|.|||..||:.:.|||||.|.::...|..|.|.|||||.|.|               
  Rat  1336 GEGDGRTALHLACRKGNVVLVQLLIWYGVDVMARDAHGNTALAYARQASS--------------- 1385

  Fly   928 GTTIPAPAPPTNGGIPAPQYNVEDTTALVELLEGLGCP-EAAPLTASGTLPRRRDT 982
                                     ...:::|...||| |...|.|:..|.|:.::
  Rat  1386 -------------------------QECIDVLLQYGCPDERFVLMATPNLSRKNNS 1416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303 124/160 (78%)
RAS 144..295 CDD:214541 120/154 (78%)
PH_AGAP 451..686 CDD:241281 107/332 (32%)
PH 454..>521 CDD:278594 51/66 (77%)
ArfGap 702..818 CDD:279720 69/115 (60%)
ANK <834..907 CDD:238125 26/72 (36%)
ANK repeat 834..866 CDD:293786 6/31 (19%)
Ank_5 859..907 CDD:290568 21/47 (45%)
ANK repeat 868..897 CDD:293786 14/28 (50%)
Agap1XP_038939665.1 Centaurin_gamma 561..722 CDD:133303 124/160 (78%)
PH_AGAP 837..>911 CDD:241281 54/76 (71%)
PH-like <1123..1163 CDD:418428 21/39 (54%)
ArfGap_AGAP2 1180..1288 CDD:350078 64/107 (60%)
ANK repeat 1304..1332 CDD:293786 8/27 (30%)
Ank_2 1307..1397 CDD:403870 32/129 (25%)
ANK repeat 1339..1370 CDD:293786 15/30 (50%)
ANK repeat 1372..1397 CDD:293786 10/64 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 260 1.000 Domainoid score I1903
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56689
Inparanoid 1 1.050 687 1.000 Inparanoid score I669
OMA 1 1.010 - - QHG48005
OrthoDB 1 1.010 - - D480835at33208
OrthoFinder 1 1.000 - - FOG0001514
OrthoInspector 1 1.000 - - otm46067
orthoMCL 1 0.900 - - OOG6_102626
Panther 1 1.100 - - LDO PTHR45819
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X686
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

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