DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenG1A and Git2

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_017453834.1 Gene:Git2 / 304546 RGDID:1359708 Length:761 Species:Rattus norvegicus


Alignment Length:212 Identity:67/212 - (31%)
Similarity:106/212 - (50%) Gaps:18/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 QRVPGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDDWPSPHLSVMLAI 773
            :|:..|..|.||..|:|.|||:|.|.|:|.||..|||:||.|||:||.|....||...|.::..:
  Rat     3 KRLRSNDVCADCSGPDPSWASVNRGTLICDECCSVHRSLGRHISQVRHLKHTPWPPTLLQMVETL 67

  Fly   774 GNSLANSVWESNT---------RQRVKPTSQASREDKERWVRSKYEAKEFL--TPLGNGSSAHPS 827
            .::.|||:||.:.         |::..|..:. ..:|..::|:||:...|:  .|..:..|. .:
  Rat    68 YSNGANSIWEHSLLDPASVMSGRRKANPQDKV-HPNKAEFIRAKYQMLAFVHRLPCRDDDSV-TA 130

  Fly   828 PSPGQQLIEAVIRADIKSIVSILANCPSEVTNAN-VSARDVRTPLLLACAIGNLAIAQLLIWNGA 891
            ....:||..:|...::::.:.:|    |....|| .......|||.:|...|.:..|:||...||
  Rat   131 KDLSKQLHSSVRTGNLETCLRLL----SLGAQANFFHPEKGSTPLHVASKAGQILQAELLAVYGA 191

  Fly   892 NIKHTDHEGRTCLAYAR 908
            :....|..|:|.:.|||
  Rat   192 DPGTHDSSGKTPVDYAR 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281
PH 454..>521 CDD:278594
ArfGap 702..818 CDD:279720 42/119 (35%)
ANK <834..907 CDD:238125 19/73 (26%)
ANK repeat 834..866 CDD:293786 6/32 (19%)
Ank_5 859..907 CDD:290568 15/48 (31%)
ANK repeat 868..897 CDD:293786 10/28 (36%)
Git2XP_017453834.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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