DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenG1A and Arap3

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_006525549.1 Gene:Arap3 / 106952 MGIID:2147274 Length:1539 Species:Mus musculus


Alignment Length:764 Identity:172/764 - (22%)
Similarity:268/764 - (35%) Gaps:228/764 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 CQKILSQRLPLPPQVQPARPTT----PQGNRLGLAPYQAPTNGQRGQQQLPLRMSADFAQAEQKL 357
            |.:..|..||...: ||:.|.|    |.....||        ..||:.|....::.|.:||....
Mouse   130 CTQRSSPLLPSSSE-QPSVPNTMEMMPNAIYFGL--------DLRGRAQAAQDVTPDSSQATVPT 185

  Fly   358 WSLQAASSSTINENNNITKYN------PGAANSL--QGDCSQVQLRDPRDL-----APPPGKELP 409
            .:.:..:.:....:.....|.      |||::..  :|.|.:......:||     |.....|||
Mouse   186 PAFRPTTGTVHIMDPGCLYYGVQPVGIPGASDRRDGRGVCQERAEHSRQDLETREDAGYASLELP 250

  Fly   410 TPTSTPTTSRKSRRRSNLFIP--SSSKKADKEKEPKSSELGSGRSIPIKQGYLYKRSSKSLNKEW 472
            ..:.....::.:....:|..|  |.|..||             |.:|:..|:|.|.|.:. |..:
Mouse   251 GDSILSLPTQDAETSDDLISPYASFSSTAD-------------RPVPLLSGWLDKLSPQG-NYVF 301

  Fly   473 KKKYVTLCDDGR-LTYHPSLHD-YMDDVHGKEIPLQYVTVKVPGQKPRGSK----SIITNSALTS 531
            ::::|..  :|| |.|..|..| :...|    |||..:      :..|.||    .:||      
Mouse   302 QRRFVQF--NGRSLMYFGSDKDPFPKGV----IPLTAI------EMTRSSKDNKFQVIT------ 348

  Fly   532 SLMANGQ-----RAQNTLSDGIGCLTLAK--DNQRKLSE-------------KLSLLG--AGSIA 574
                 ||     |.::.....:.|.||..  ..||.|..             .|.|.|  |...|
Mouse   349 -----GQRVFVFRTESEAQRDLWCSTLQSCLKEQRLLGHPRPPHPPRPLRTGTLELRGHKAKVFA 408

  Fly   575 AGAGGEPLKSNSSQQTSGDEGIAMSNSNSQTFIAGEVANAGNKLEAQTPNVKKRHRRMKSSSVKA 639
            |...||.....|.|..|...||..                   :|.|..:|    |..||.|   
Mouse   409 ALIPGELALYKSEQAFSLGIGICF-------------------IELQGCSV----RETKSRS--- 447

  Fly   640 NEADDNDGYEFYIVSLDSKQWHFEAANSEERDEWVAAVEQEIFKSLQSIESSKTKQATSTDLAAM 704
                       :.:....:.:.|.|.:...|..|.||:::.:.::|...|               
Mouse   448 -----------FDLLTPHRCFSFTAESGGARQSWAAALQEAVTETLSDYE--------------- 486

  Fly   705 LAIRQRV---PGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDD--WPS 764
              :.::|   |.|..|.||.|..|:||::||||::|.:|:|.||.|||.||||:||.||.  |.:
Mouse   487 --VAEKVWSNPANRHCADCRASRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSN 549

  Fly   765 PHLSVMLAIGNSLANSVWESNTRQRVKPTSQASREDKERWVRSKYEAKEFLTPLGNGSSAHPSPS 829
            ..:.:.:.:||..||..|..     ..|..:....|.....|.::.::::  .||.....||...
Mouse   550 EIVQLFIVLGNDRANCFWAG-----ALPPGEGLHPDSAPGPRGEFISRKY--KLGLFRKPHPRHP 607

  Fly   830 PGQQLIEAVIRAD-----IKSIVSILANCPSEVTNANVSARDVRTPLLLACAIGNLAIAQLL--- 886
            ...||::|:..|.     :|::..:|.          |...:...||..:...|:|  ..||   
Mouse   608 DHSQLLQALCAAMAGPNLLKNMAQLLC----------VETSEGEEPLSPSALNGSL--LSLLPSD 660

  Fly   887 ---IWNGANIKHTDHEGRTCLAYARAAQSLATAKSIKAAAAAQAGTTIPAPAPPTNGGIPAP--- 945
               ::|...:..|......|                 .:.:.:||      |||...|..||   
Mouse   661 SPGVYNEVVVPATYRGFLYC-----------------GSISNKAG------APPLRRGRDAPPRL 702

  Fly   946 ---------QYNVEDTTALVELLE-------GLGCPEAAPLTASGTLPR 978
                     .:..|.:...:.||:       |:..|.|.|    |.|.|
Mouse   703 WCVLGAALEMFASESSPEPLSLLQPQDIVCLGVSPPPADP----GDLDR 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303 1/2 (50%)
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281 58/262 (22%)
PH 454..>521 CDD:278594 18/68 (26%)
ArfGap 702..818 CDD:279720 39/120 (33%)
ANK <834..907 CDD:238125 15/83 (18%)
ANK repeat 834..866 CDD:293786 6/36 (17%)
Ank_5 859..907 CDD:290568 10/53 (19%)
ANK repeat 868..897 CDD:293786 7/34 (21%)
Arap3XP_006525549.1 SAM_Arap1,2,3 4..66 CDD:188889
PHA03247 <81..312 CDD:223021 44/206 (21%)
PH1_ARAP 285..377 CDD:270073 27/115 (23%)
PH2_ARAP 392..475 CDD:270074 26/119 (22%)
ArfGap_ARAP3 485..600 CDD:350089 42/138 (30%)
PH-like 671..783 CDD:388408 20/104 (19%)
PH-like 798..891 CDD:388408
RhoGAP_ARAP 906..1081 CDD:239850
Ubiquitin_like_fold 1113..1210 CDD:391949
PH5_ARAP 1210..1326 CDD:270079
PLN02983 <1472..>1538 CDD:215533
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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