DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenG1A and arhgap10

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_002933548.2 Gene:arhgap10 / 100145146 XenbaseID:XB-GENE-921747 Length:788 Species:Xenopus tropicalis


Alignment Length:408 Identity:79/408 - (19%)
Similarity:124/408 - (30%) Gaps:123/408 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IRDHVVCIEDSFVNSQEWTIS----------RSVP------DLRLGIVGSLNSGKSA-------- 157
            :.|...|.:....:|:||.:.          ||:|      :|....:....||...        
 Frog   432 LMDVKTCCDVDLDSSEEWEVKTVTSALKLYLRSLPEPLMTYELHDQFINPTKSGSPESRVNSIHH 496

  Fly   158 LVHRYLTGSYMQEESPEGGRFKKEVFI--------DGQSYLLLIRDEG--------GAPEMQFAG 206
            |:|:.          ||..|...::.|        ..:..|:.:.:.|        ...|...|.
 Frog   497 LIHKL----------PEKNREMLDILITHLANVAHHAKKNLMTVANLGVVFGPTLMRPQEETVAA 551

  Fly   207 WVDA----VIFVFSLENEGSFNTVYNYYTKMAHFRNGQEIPMILVGTQD--AISERNPRVIDDTR 265
            .:|.    ::....:||....            |:|.   |..|....|  :||..|.......|
 Frog   552 IMDLKFQNIVVEILIENHEKI------------FKNP---PSGLEAESDSSSISPPNAPPRQSRR 601

  Fly   266 ARKLASDLKRCSYYETCATYGLNVERVFQDACQKILSQRLPLPP------QVQPARPTTPQGNRL 324
            .||           .....|.|::|   .|.....|:.|...|.      ..|...||||..|  
 Frog   602 HRK-----------RPVPVYDLSLE---LDNTDMNLTPREDTPTGSTDSLSPQSLTPTTPHTN-- 650

  Fly   325 GLAPYQAPTNGQRGQQQLPLRMSADFAQAEQKLWSLQAASSSTINENNNITKYNPGAANSLQGDC 389
                   .|..:|......:....|::.:|..:.|   ...|.||:.:......|.:        
 Frog   651 -------ATADERNHIMASIGGLVDWSASENLIHS---PLVSWINDESPAASTVPTS-------- 697

  Fly   390 SQVQLRDPRDLAPPPGKELPTPTSTPTTSRKSRRRSNLFIPSSSKKADKEKEPKSSELGSGRSIP 454
               |..:|..:...|.:||..|..:.|||.|:..       ||:||..|...|..:|..|..|..
 Frog   698 ---QAAEPAPVQQDPEEELTLPAHSLTTSDKAAE-------SSAKKKAKAVYPCEAEHSSELSFE 752

  Fly   455 IKQGYLYKRSSKSLNKEW 472
            :  |.:::....|....|
 Frog   753 V--GAVFEDVHYSREPGW 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303 31/186 (17%)
RAS 144..295 CDD:214541 29/180 (16%)
PH_AGAP 451..686 CDD:241281 4/22 (18%)
PH 454..>521 CDD:278594 3/19 (16%)
ArfGap 702..818 CDD:279720
ANK <834..907 CDD:238125
ANK repeat 834..866 CDD:293786
Ank_5 859..907 CDD:290568
ANK repeat 868..897 CDD:293786
arhgap10XP_002933548.2 BAR_GRAF2 19..225 CDD:153319
BAR-PH_GRAF_family 267..371 CDD:269953
RhoGAP_Graf 367..568 CDD:239839 22/145 (15%)
SH3_GRAF2 734..787 CDD:212998 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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