DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenG1A and acap3

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_012821390.1 Gene:acap3 / 100127680 XenbaseID:XB-GENE-1013301 Length:871 Species:Xenopus tropicalis


Alignment Length:809 Identity:173/809 - (21%)
Similarity:256/809 - (31%) Gaps:350/809 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 KADKEKEPKSSELGSGRSIPIKQGYL-----YKRSSKSLNKEWKKK------------------- 475
            |.||..:..||.|.:|::      ||     :....:.|:::.||.                   
 Frog    32 KLDKLVKLCSSMLEAGKT------YLTTNKHFVSGIRDLSQQCKKDEMISECLDKFGDSLQEMVN 90

  Fly   476 -YVTLCDDGRLTYHPSLHDYM-DDVHG-KEIPLQYVTVKVPGQKPRGSKSIITNSALTSSLMANG 537
             ::.|.|..:.:....||.:: |||.. ||...|:..|:               ..|..:|:.|.
 Frog    91 YHMILFDQAQRSVRQQLHMFVKDDVRKFKESKKQFDKVR---------------EDLDIALVKNA 140

  Fly   538 Q----------RAQNTLSDGIGCLT-LAKD-----NQRKLSEKLSLLGAGSIAAGAGGEPLKSNS 586
            |          .|.:||:....|.. ||.|     |..:..:|..:|.|          .|....
 Frog   141 QAPRHKPHEVEEASSTLTITRKCFRHLALDYVLQINVLQAKKKFEILDA----------MLSFMH 195

  Fly   587 SQQTSGDEGIAMSNSNSQTF--IAGE-----VANAGNKLEAQTPNVKKRHRR-MKSSSVKANEAD 643
            :|.|...:|.::.|..:...  :|.|     :.:|..|.|.:..:...:.|. ::..|...::||
 Frog   196 AQYTFFQQGYSLLNELNPYMKQLASELDQLVIDSAVEKREMEHKHATIQQRTLLQDFSYDDSKAD 260

  Fly   644 DN---------DGYEFYIVSLDSKQWH-------------------------------------- 661
            .|         :||.|...|...|.|:                                      
 Frog   261 FNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKLKDVLTVVVEDLRLCTVKPCED 325

  Fly   662 ------FEA----------ANSEE-RDEWVAAVEQEIFK--------------------SLQSIE 689
                  ||.          |:||: |..|:.||:..|..                    |..||:
 Frog   326 IERRFCFEVVSPSKSCMLQADSEKLRQSWIQAVQASIASAYRETPDNYYIERLDRTASPSTSSID 390

  Fly   690 SSKTKQATSTDLAAMLAIRQRVPGNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKV 754
            |:...:..|....::|...|.:.||..|.|||..:|.|||:|||:.:||||||:||:||.|.|||
 Frog   391 SASDSRERSVKGESILQRVQSIAGNDQCCDCGQTDPRWASINLGITLCIECSGIHRSLGVHFSKV 455

  Fly   755 RSLGLDDWPSPHLSVMLAIGNSLANSVWESNTRQ--RVKPTSQASREDKERWVRSKYEAKEFLTP 817
            |||.||.|....|.:|..:|||..|.::|:....  ..||||..||:|||.|:::||..|:||..
 Frog   456 RSLTLDSWEPELLKLMCELGNSTINQIYEAKCEHLGLKKPTSGCSRQDKEIWIKAKYVEKKFLKR 520

  Fly   818 LG--------------------NGS----------------SAHP-------------------- 826
            ||                    |.|                ||.|                    
 Frog   521 LGAVEVENDRKPQRWSVKKCHRNNSTTKVPSTRRKYRHEMGSASPAMLSSAATLERKFRRDSLFC 585

  Fly   827 --------------------SPSPGQQLIEAV--------------------------------- 838
                                :|.|.|..:.||                                 
 Frog   586 PDELDSLFSYFDTGSGPRSVNPLPAQHPLPAVPWTGSGAEPGGSAMPFLPDGGLSSDSGLGGSTD 650

  Fly   839 ---------------------------------------------------IRADIKSIVSILAN 852
                                                               .||.....:.::|.
 Frog   651 GSNDILVFGAVVDSVTEEECEVSEDSSGEVETEQEPSDPEDLRELHPGLLMFRASRTRNLPVMAE 715

  Fly   853 CPSEVTNAN-VSARD-VRTPLLLACAIGNLAIAQLLIWNGANIKHTD--------------HEGR 901
            ..:...|.| |:..| .:|||:.|...|:|...:.|:.|||::..||              |.|:
 Frog   716 ALANGANVNWVNDEDESKTPLIQAVIGGSLIACEFLLQNGADVNQTDMRGRAPIHHATYLGHTGQ 780

  Fly   902 TCLAYARAAQSLATAK------SIKAAAA 924
            .||...|.|...|..:      ||...||
 Frog   781 VCLFLKRGANQHAVDEDGQDPLSIAVQAA 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281 63/369 (17%)
PH 454..>521 CDD:278594 16/93 (17%)
ArfGap 702..818 CDD:279720 57/117 (49%)
ANK <834..907 CDD:238125 25/172 (15%)
ANK repeat 834..866 CDD:293786 8/116 (7%)
Ank_5 859..907 CDD:290568 20/63 (32%)
ANK repeat 868..897 CDD:293786 10/28 (36%)
acap3XP_012821390.1 BAR_ACAP3 16..215 CDD:153321 43/213 (20%)
PH_ACAP 271..367 CDD:270070 16/95 (17%)
ArfGap_ACAP3 403..518 CDD:350075 55/114 (48%)
ANKYR <689..818 CDD:223738 30/121 (25%)
ANK repeat 729..762 CDD:293786 11/32 (34%)
ANK repeat 764..795 CDD:293786 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R258
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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