DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenG1A and appl2

DIOPT Version :9

Sequence 1:NP_723849.1 Gene:CenG1A / 34803 FlyBaseID:FBgn0028509 Length:995 Species:Drosophila melanogaster
Sequence 2:NP_001121547.1 Gene:appl2 / 100000135 ZFINID:ZDB-GENE-081016-2 Length:662 Species:Danio rerio


Alignment Length:494 Identity:99/494 - (20%)
Similarity:180/494 - (36%) Gaps:124/494 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 ITNSALTSSLMANGQR---AQNTLSDGIGCLTLAKDNQRKLSEKLSLLGAGSIAAGAGGEPLKSN 585
            :||  .|:.|:.:.||   |||.::       ||.:   :||::|......:.|...|.|.:.:.
Zfish    34 LTN--YTNQLLQSMQRVFGAQNEMA-------LATE---QLSKQLLEYEKQNFALAKGDEEVINT 86

  Fly   586 SSQQTSGDEGIAMSNSNSQTFIAGEVANAGNKLEAQTPNVKKRHRRM-KSSSVKANEADDNDGYE 649
            ..|.....|.:...:|...|.||.::.         .|.|:.|.:.: :.|::|          |
Zfish    87 LQQFAKSVEELNALHSELSTQIADKMV---------FPMVQFREKDLTEISTLK----------E 132

  Fly   650 FYIVSLDSKQWHFEAA--------NSEERDEWVAAVEQEIFKSLQSIESSKTKQATSTDLAAMLA 706
            .:.::.|    ..|||        ...|.::..|.|.:|:..|.:     |..||......|:.|
Zfish   133 IFSIATD----EHEAAMVKYSRLPKKRENEKVKAEVVREVAYSRR-----KQHQAAMQYYCALNA 188

  Fly   707 I--RQRV----PGNGFC---VDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHI---------SK 753
            :  |:||    |..|:.   ::......|..|..|...: ...|.::.::.|.:         |:
Zfish   189 LQYRKRVAMLEPMLGYTHAQINFFKKGMELVSKKLDSFL-NSVSNMNESIESQLEIDAEVMRSSQ 252

  Fly   754 VRSLGLDDWPSPHLSVMLAIGNSLANSVWESNTRQRVKPTSQASREDKERWVRSKYEAKEFLTPL 818
            ...|.:||      ||.:...:..|.|      |..::.....:..:|...|.:.::...|.|..
Zfish   253 RELLSVDD------SVYMPDHDQAAVS------RALIQKAGYLNIRNKTGLVTTAWDRLFFFTQG 305

  Fly   819 GNGSSAHPSPSPGQQLIEAVIRADIKSIVSILANCPSEVTNANVSARDVRTPLLL---------- 873
            ||..........|..:::    .|..|::::  :|........:::.:.:|.|:|          
Zfish   306 GNLMCQPRGAVAGGMVLD----LDNSSVMAV--DCEDRRYCFQITSPNGKTSLILQAESKREYEE 364

  Fly   874 -ACAIGNLAIAQLLIWNGANIKHTDH-EGRTCLAYARAAQSLATAKSIKAAAAAQAGTTIPAPAP 936
             .|.:.|::         ..|..||: |......:..|.|::....|.:..|   .|:..|..|.
Zfish   365 WICTLNNIS---------RQIYLTDNPEAVAIKLHQTALQAVTPITSFEKRA---EGSPNPDRAK 417

  Fly   937 PTNGGIPAPQYNVEDTTALVELLEGLGCPEAAPLTASGT 975
            |  ||:|......|.::..:|       ||  .|...||
Zfish   418 P--GGLPVTSQEAEKSSVSLE-------PE--DLIVPGT 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenG1ANP_723849.1 SelP_N <5..41 CDD:282453
Centaurin_gamma 143..300 CDD:133303
RAS 144..295 CDD:214541
PH_AGAP 451..686 CDD:241281 38/173 (22%)
PH 454..>521 CDD:278594
ArfGap 702..818 CDD:279720 25/133 (19%)
ANK <834..907 CDD:238125 12/84 (14%)
ANK repeat 834..866 CDD:293786 3/31 (10%)
Ank_5 859..907 CDD:290568 9/59 (15%)
ANK repeat 868..897 CDD:293786 6/39 (15%)
appl2NP_001121547.1 BAR 21..235 CDD:299863 52/241 (22%)
BAR-PH_APPL 253..375 CDD:270067 23/148 (16%)
PH 277..377 CDD:278594 15/114 (13%)
PTB_APPL 488..614 CDD:269980
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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