Sequence 1: | NP_477419.1 | Gene: | RpII33 / 34796 | FlyBaseID: | FBgn0026373 | Length: | 275 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_179142.1 | Gene: | NRPE3B / 816032 | AraportID: | AT2G15400 | Length: | 319 | Species: | Arabidopsis thaliana |
Alignment Length: | 296 | Identity: | 115/296 - (38%) |
---|---|---|---|
Similarity: | 162/296 - (54%) | Gaps: | 41/296 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 YANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLSDEFLAHR 67
Fly 68 IGLIPLISDDVVER--LQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADLKSSNAKVLPV 130
Fly 131 --TSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVCFEYDPD--- 190
Fly 191 -NSMRHTLYPK---------------------------PDEWPKSEHTELEDDQYEAPYNWEAKP 227
Fly 228 --NKFFFNVESAGALKPENIVVMGVQVLKNKLSNLQ 261 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpII33 | NP_477419.1 | RNAP_II_RPB3 | 7..267 | CDD:132909 | 114/292 (39%) |
RPOLD | 19..261 | CDD:214766 | 107/278 (38%) | ||
NRPE3B | NP_179142.1 | RNAP_II_RPB3 | 10..302 | CDD:132909 | 114/292 (39%) |
RPOLD | 22..297 | CDD:214766 | 107/278 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 177 | 1.000 | Domainoid score | I1078 |
eggNOG | 1 | 0.900 | - | - | E1_COG0202 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2017 | |
Inparanoid | 1 | 1.050 | 191 | 1.000 | Inparanoid score | I1377 |
OMA | 1 | 1.010 | - | - | QHG53541 | |
OrthoDB | 1 | 1.010 | - | - | D834009at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004444 | |
OrthoInspector | 1 | 1.000 | - | - | otm2753 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101363 | |
Panther | 1 | 1.100 | - | - | O | PTHR11800 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3150 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.840 |