Sequence 1: | NP_477419.1 | Gene: | RpII33 / 34796 | FlyBaseID: | FBgn0026373 | Length: | 275 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033111.2 | Gene: | Polr1c / 20016 | MGIID: | 103288 | Length: | 346 | Species: | Mus musculus |
Alignment Length: | 310 | Identity: | 79/310 - (25%) |
---|---|---|---|
Similarity: | 139/310 - (44%) | Gaps: | 74/310 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 VQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLSDEFLAHRIGLIPL 73
Fly 74 ISDDVV--ERLQYTRDCICLDFCPECSVEFTLDVKCSEE-------------------QTRHVTT 117
Fly 118 ADLKSSNAKVLPVTSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAG 182
Fly 183 VCFEYDPDNSMRHTLYPKPDEWPKSEH---------TELED--------------DQYEAPYNWE 224
Fly 225 AKPNK----------FFFNVESAGALKPENIVVMGVQVLKNKLSNLQTQL 264 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpII33 | NP_477419.1 | RNAP_II_RPB3 | 7..267 | CDD:132909 | 79/310 (25%) |
RPOLD | 19..261 | CDD:214766 | 76/295 (26%) | ||
Polr1c | NP_033111.2 | RNAP_I_II_AC40 | 49..339 | CDD:132910 | 78/307 (25%) |
RPOLD | 61..336 | CDD:214766 | 76/294 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0202 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D834009at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |