| Sequence 1: | NP_476596.1 | Gene: | Arpc1 / 34793 | FlyBaseID: | FBgn0001961 | Length: | 377 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_009793.1 | Gene: | ARC40 / 852536 | SGDID: | S000000438 | Length: | 384 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 375 | Identity: | 146/375 - (38%) |
|---|---|---|---|
| Similarity: | 214/375 - (57%) | Gaps: | 33/375 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 12 ASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCAAD 76
Fly 77 RNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKHI 141
Fly 142 KKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIK--DIEEPPTPTPWGNRKPLGQLMAEFRN 204
Fly 205 SQTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVA 269
Fly 270 GYSCVPLLYSLTADGKLVLSGKLDKSQKKESS---------------------GITAMRIFQSMD 313
Fly 314 RNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNV 363 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Arpc1 | NP_476596.1 | WD40 | <3..236 | CDD:295369 | 101/225 (45%) |
| WD40 | <3..181 | CDD:225201 | 86/170 (51%) | ||
| WD40 repeat | 14..53 | CDD:293791 | 6/38 (16%) | ||
| WD40 repeat | 59..97 | CDD:293791 | 18/37 (49%) | ||
| WD40 repeat | 103..142 | CDD:293791 | 26/38 (68%) | ||
| WD40 | 146..>366 | CDD:295369 | 81/241 (34%) | ||
| WD40 repeat | 150..203 | CDD:293791 | 27/54 (50%) | ||
| WD40 repeat | 213..247 | CDD:293791 | 7/33 (21%) | ||
| ARC40 | NP_009793.1 | WD40 | <5..315 | CDD:225201 | 122/302 (40%) |
| WD40 repeat | 22..61 | CDD:293791 | 6/38 (16%) | ||
| WD40 repeat | 67..104 | CDD:293791 | 18/37 (49%) | ||
| WD40 repeat | 110..149 | CDD:293791 | 26/38 (68%) | ||
| WD40 repeat | 157..203 | CDD:293791 | 23/45 (51%) | ||
| WD40 repeat | 217..254 | CDD:293791 | 7/36 (19%) | ||
| WD40 repeat | 258..295 | CDD:293791 | 11/37 (30%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C157346551 | |
| Domainoid | 1 | 1.000 | 97 | 1.000 | Domainoid score | I1636 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1523 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H4675 | |
| Inparanoid | 1 | 1.050 | 251 | 1.000 | Inparanoid score | I660 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54320 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001692 | |
| OrthoInspector | 1 | 1.000 | - | - | oto99465 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101628 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10709 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R87 |
| SonicParanoid | 1 | 1.000 | - | - | X1085 | |
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.790 | |||||