| Sequence 1: | NP_476596.1 | Gene: | Arpc1 / 34793 | FlyBaseID: | FBgn0001961 | Length: | 377 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001189645.1 | Gene: | ARPC1A / 817641 | AraportID: | AT2G30910 | Length: | 378 | Species: | Arabidopsis thaliana |
| Alignment Length: | 375 | Identity: | 145/375 - (38%) |
|---|---|---|---|
| Similarity: | 206/375 - (54%) | Gaps: | 41/375 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 SITCHAWNKDRTQIALSPNNHEIHIYSREGSD-WKLADVLNQHDLRVMGIDWAKNTNRIVSCAAD 76
Fly 77 RNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKHI 141
Fly 142 KKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEE------PPTPTPWGNRKPLGQLMA 200
Fly 201 EFRNSQTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADATNGNTVIRCRTGY--LPFLSCEWVSP 263
Fly 264 TSVVVAGYSCVPLLYSLTADG-----------KLVLSGKLDKSQKKESSGITAMRIFQSMDRNMR 317
Fly 318 TENTDTVVDSIHQNAITSVRLYAGDKASATKV---STSGVDGQLVIWNVE 364 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Arpc1 | NP_476596.1 | WD40 | <3..236 | CDD:295369 | 111/229 (48%) |
| WD40 | <3..181 | CDD:225201 | 97/168 (58%) | ||
| WD40 repeat | 14..53 | CDD:293791 | 20/39 (51%) | ||
| WD40 repeat | 59..97 | CDD:293791 | 17/37 (46%) | ||
| WD40 repeat | 103..142 | CDD:293791 | 26/38 (68%) | ||
| WD40 | 146..>366 | CDD:295369 | 71/241 (29%) | ||
| WD40 repeat | 150..203 | CDD:293791 | 26/58 (45%) | ||
| WD40 repeat | 213..247 | CDD:293791 | 10/33 (30%) | ||
| ARPC1A | NP_001189645.1 | WD40 | 8..371 | CDD:225201 | 145/375 (39%) |
| WD40 repeat | 13..53 | CDD:293791 | 20/39 (51%) | ||
| WD40 | 48..>282 | CDD:295369 | 102/245 (42%) | ||
| WD40 repeat | 59..96 | CDD:293791 | 17/37 (46%) | ||
| WD40 repeat | 102..141 | CDD:293791 | 26/38 (68%) | ||
| WD40 repeat | 149..194 | CDD:293791 | 23/44 (52%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 1 | 1.000 | 105 | 1.000 | Domainoid score | I2211 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1523 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 256 | 1.000 | Inparanoid score | I1001 |
| OMA | 1 | 1.010 | - | - | QHG54320 | |
| OrthoDB | 1 | 1.010 | - | - | D848569at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001692 | |
| OrthoInspector | 1 | 1.000 | - | - | otm3125 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101628 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10709 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1085 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.840 | |||||