| Sequence 1: | NP_476596.1 | Gene: | Arpc1 / 34793 | FlyBaseID: | FBgn0001961 | Length: | 377 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_012825694.1 | Gene: | arpc1a / 394565 | XenbaseID: | XB-GENE-6034682 | Length: | 370 | Species: | Xenopus tropicalis |
| Alignment Length: | 352 | Identity: | 204/352 - (57%) |
|---|---|---|---|
| Similarity: | 260/352 - (73%) | Gaps: | 3/352 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 LASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCAA 75
Fly 76 DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKH 140
Fly 141 IKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEFRNS 205
Fly 206 QTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVAG 270
Fly 271 YSCVPLLYSLTADGKLVLSGKLDKSQKKESSGITAMRIFQSMDRNMRTENTDTVVDSIHQNAITS 335
Fly 336 VRLYAGDKASATKVSTSGVDGQLVIWN 362 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Arpc1 | NP_476596.1 | WD40 | <3..236 | CDD:295369 | 155/224 (69%) |
| WD40 | <3..181 | CDD:225201 | 125/169 (74%) | ||
| WD40 repeat | 14..53 | CDD:293791 | 24/38 (63%) | ||
| WD40 repeat | 59..97 | CDD:293791 | 25/37 (68%) | ||
| WD40 repeat | 103..142 | CDD:293791 | 36/38 (95%) | ||
| WD40 | 146..>366 | CDD:295369 | 106/217 (49%) | ||
| WD40 repeat | 150..203 | CDD:293791 | 34/52 (65%) | ||
| WD40 repeat | 213..247 | CDD:293791 | 19/33 (58%) | ||
| arpc1a | XP_012825694.1 | WD40 repeat | 11..50 | CDD:293791 | 24/38 (63%) |
| WD40 | 46..>272 | CDD:421866 | 149/228 (65%) | ||
| WD40 repeat | 56..93 | CDD:293791 | 25/37 (68%) | ||
| WD40 repeat | 98..138 | CDD:293791 | 37/39 (95%) | ||
| WD40 repeat | 146..199 | CDD:293791 | 35/54 (65%) | ||
| WD40 repeat | 207..243 | CDD:293791 | 19/35 (54%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 183 | 1.000 | Domainoid score | I3367 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 441 | 1.000 | Inparanoid score | I1613 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D317177at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001692 | |
| OrthoInspector | 1 | 1.000 | - | - | otm48305 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R87 |
| SonicParanoid | 1 | 1.000 | - | - | X1085 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 7 | 7.090 | |||||