| Sequence 1: | NP_476596.1 | Gene: | Arpc1 / 34793 | FlyBaseID: | FBgn0001961 | Length: | 377 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_958500.1 | Gene: | arpc1a / 394243 | ZFINID: | ZDB-GENE-040116-1 | Length: | 370 | Species: | Danio rerio |
| Alignment Length: | 362 | Identity: | 202/362 - (55%) |
|---|---|---|---|
| Similarity: | 263/362 - (72%) | Gaps: | 5/362 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 LASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCAA 75
Fly 76 DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESENDWWVSKH 140
Fly 141 IKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEFRNS 205
Fly 206 QTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVAG 270
Fly 271 YSCVPLLYSLTADGKLVLSGKLDKSQKKESSGITAMRIFQSMDRNMRTENTDTVVDSIHQNAITS 335
Fly 336 VRLYAGDKASATKVSTSGVDGQLVIWNVE--QGGING 370 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Arpc1 | NP_476596.1 | WD40 | <3..236 | CDD:295369 | 154/224 (69%) |
| WD40 | <3..181 | CDD:225201 | 126/169 (75%) | ||
| WD40 repeat | 14..53 | CDD:293791 | 25/38 (66%) | ||
| WD40 repeat | 59..97 | CDD:293791 | 25/37 (68%) | ||
| WD40 repeat | 103..142 | CDD:293791 | 36/38 (95%) | ||
| WD40 | 146..>366 | CDD:295369 | 101/221 (46%) | ||
| WD40 repeat | 150..203 | CDD:293791 | 35/52 (67%) | ||
| WD40 repeat | 213..247 | CDD:293791 | 15/33 (45%) | ||
| arpc1a | NP_958500.1 | WD40 | 1..362 | CDD:225201 | 200/356 (56%) |
| WD40 repeat | 11..50 | CDD:293791 | 25/38 (66%) | ||
| WD40 | 45..>277 | CDD:295369 | 145/234 (62%) | ||
| WD40 repeat | 56..93 | CDD:293791 | 25/37 (68%) | ||
| WD40 repeat | 98..138 | CDD:293791 | 37/39 (95%) | ||
| WD40 repeat | 146..199 | CDD:293791 | 35/52 (67%) | ||
| WD40 repeat | 207..241 | CDD:293791 | 15/33 (45%) | ||
| WD40 repeat | 249..320 | CDD:293791 | 24/70 (34%) | ||
| WD40 repeat | 327..355 | CDD:293791 | 12/27 (44%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C170596045 | |
| Domainoid | 1 | 1.000 | 176 | 1.000 | Domainoid score | I3562 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1523 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H4675 | |
| Inparanoid | 1 | 1.050 | 436 | 1.000 | Inparanoid score | I1655 |
| OMA | 1 | 1.010 | - | - | QHG54320 | |
| OrthoDB | 1 | 1.010 | - | - | D317177at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001692 | |
| OrthoInspector | 1 | 1.000 | - | - | otm25644 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101628 | |
| Panther | 1 | 1.100 | - | - | O | PTHR10709 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R87 |
| SonicParanoid | 1 | 1.000 | - | - | X1085 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 15.800 | |||||