Sequence 1: | NP_476596.1 | Gene: | Arpc1 / 34793 | FlyBaseID: | FBgn0001961 | Length: | 377 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001355516.1 | Gene: | arx-3 / 3565442 | WormBaseID: | WBGene00000201 | Length: | 375 | Species: | Caenorhabditis elegans |
Alignment Length: | 365 | Identity: | 184/365 - (50%) |
---|---|---|---|
Similarity: | 253/365 - (69%) | Gaps: | 15/365 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 YTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNR 69
Fly 70 IVSCAADRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAVGSGARLISVCYFESEND 134
Fly 135 WWVSKHIKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLM 199
Fly 200 AEFRNSQTSGGGWINSVSFSSDGNKVCWVGHDSCVSIADAT-NGNTVIRCRTGYLPFLSCEWVSP 263
Fly 264 TSVVVAGYSCVPLLYSLTADGKLVLSG--KLD-KSQKKESSGITAMRIFQSMDRNMRTENTDTVV 325
Fly 326 DSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNVEQ 365 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Arpc1 | NP_476596.1 | WD40 | <3..236 | CDD:295369 | 139/230 (60%) |
WD40 | <3..181 | CDD:225201 | 114/175 (65%) | ||
WD40 repeat | 14..53 | CDD:293791 | 21/38 (55%) | ||
WD40 repeat | 59..97 | CDD:293791 | 22/37 (59%) | ||
WD40 repeat | 103..142 | CDD:293791 | 31/38 (82%) | ||
WD40 | 146..>366 | CDD:295369 | 94/224 (42%) | ||
WD40 repeat | 150..203 | CDD:293791 | 32/52 (62%) | ||
WD40 repeat | 213..247 | CDD:293791 | 13/34 (38%) | ||
arx-3 | NP_001355516.1 | ANAPC4_WD40 | <15..67 | CDD:315554 | 27/51 (53%) |
WD40 repeat | 17..56 | CDD:293791 | 21/38 (55%) | ||
WD40 | 50..>272 | CDD:356469 | 132/227 (58%) | ||
WD40 repeat | 62..100 | CDD:293791 | 23/38 (61%) | ||
WD40 repeat | 105..144 | CDD:293791 | 31/38 (82%) | ||
WD40 repeat | 152..186 | CDD:293791 | 21/33 (64%) | ||
WD40 repeat | 210..247 | CDD:293791 | 13/36 (36%) | ||
WD40 repeat | 253..296 | CDD:293791 | 18/45 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160167346 | |
Domainoid | 1 | 1.000 | 143 | 1.000 | Domainoid score | I2897 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1523 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H4675 | |
Inparanoid | 1 | 1.050 | 377 | 1.000 | Inparanoid score | I1207 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54320 | |
OrthoDB | 1 | 1.010 | - | - | D317177at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001692 | |
OrthoInspector | 1 | 1.000 | - | - | oto19165 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101628 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10709 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R87 |
SonicParanoid | 1 | 1.000 | - | - | X1085 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.800 |